Structure of PDB 7ob9 Chain A Binding Site BS03

Receptor Information
>7ob9 Chain A (length=1535) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSANGLYDL
ALGPADSKEVCSTCVQDFSNCSGHLGHIELPLTVYNPLLFDKLYLLLRGS
CLNCHMLTCPRAVIHLLLCQLRVLEVGALQAVYELERILNRFLEENPDPS
ASEIREELEQYTTEIVQNNLLGSQGAHVKNVCESKSKLIALFWKAHMNAK
RCPHCKTGRSVVRKEHNSKLTITFPAGYLTPTSAREHLSALWKNEGFFLN
YLFSGMDDDGMESRFNPSVFFLDFLVVPPSRYRPVSRLGDQMFTNGQTVN
LQAVMKDVVLIRKLLALMAQEQKIDRSFLSTLPGQSLIDKLYNIWIRLQS
HVNIVFDSEMDKLMMDKYPGIRQILEKKEGLFRKHMMGKRVDYAARSVIC
PDMYINTNEIGIPMVFATKLTYPQPVTPWNVQELRQAVINGPNVHPGASM
VINEDGSRTALSAVDMTQREAVAKQLLTPATGAPKPQGTKIVCRHVKNGD
ILLLNRQPTLHRPSIQAHRARILPEEKVLRLHYANCKAYNADFDGDEMNA
HFPQSELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGASMTTRGC
FFTREHYMELVYRGLTDKVGRVKLLSPSILKPFPLWTGKQVVSTLLINII
PEDHIPLNLSGKAKITGKAWVKETPRSVPGFNPDSMCESQVIIREGELLC
GVLDKAHYGSSAYGLVHCCYEIYGGETSGKVLTCLARLFTAYLQLYRGFT
LGVEDILVKPKADVKRQRIIEESTHCGPQAVRAALNLPEAASYDEVRGKW
QDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENSLQM
MVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPR
AGGFVTGRFLTGIKPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHL
EGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQPKQFPFLASNYEV
IMKSQHLHEVLSRADPKKALHHFRAIKKWQSKHPNTLLRRGAFLSYSQKI
QEAVKALKLESENRNGRSPGTQEMLRMWYELDEESRRKYQKKAAACPDPS
LSVWRPDIYFASVSETFETKVDDYSQEWAAQTEKSYEKSELSLDRLRTLL
QLKWQRSLCEPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIP
RLREILMVASANIKTPMMSVPVLNTKKALKRVKSLKKQLTRVCLGEVLQK
IDVQESFCMEEKQNKFQVYQLRFQFLPHAYYQQEKCLRPEDILRFMETRF
FKLLMESIKKKNNKERRVQAVREIHPFIDDYQYDTEESLWCQVTVKLPLM
KINFDMSSLVVSLAHGAVIYATKGITRCLLNETTNNKNEKELVLNTEGIN
LPELFKYAEVLDLRRLYSNDIHAIANTYGIEAALRVIEKEIKDVFAVYGI
AVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLKQA
TMLGSHDELRSPSACLVVGKVVRGGTGLFELKQPL
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7ob9 Cryo-EM structures of human RNA polymerase I.
Resolution2.7 Å
Binding residue
(original residue number in PDB)		R204 F320 R418 K424 R429 R436 R442 Q553 T982 S983 Y987 E1675 T1676
Binding residue
(residue number reindexed from 1)		R201 F293 R372 K378 R383 R390 R396 Q507 T936 S937 Y941 E1491 T1492
Enzymatic activity
Enzyme Commision number 2.7.7.6: DNA-directed RNA polymerase.
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0001054 RNA polymerase I activity
GO:0003677 DNA binding
GO:0003682 chromatin binding
GO:0003899 DNA-directed 5'-3' RNA polymerase activity
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0016779 nucleotidyltransferase activity
GO:0034062 5'-3' RNA polymerase activity
GO:0046872 metal ion binding
GO:0071667 DNA/RNA hybrid binding
Biological Process
GO:0006351 DNA-templated transcription
GO:0006360 transcription by RNA polymerase I
GO:1904750 negative regulation of protein localization to nucleolus
Cellular Component
GO:0000428 DNA-directed RNA polymerase complex
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005694 chromosome
GO:0005730 nucleolus
GO:0005736 RNA polymerase I complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7ob9, PDBe:7ob9, PDBj:7ob9
PDBsum7ob9
PubMed34887565
UniProtO95602|RPA1_HUMAN DNA-directed RNA polymerase I subunit RPA1 (Gene Name=POLR1A)

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