Structure of PDB 7m4e Chain A Binding Site BS03
Receptor Information
>7m4e Chain A (length=310) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
NHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEAC
SIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQ
MWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQ
KAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDS
LRQEGFLTDDLVKGETKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLY
FTGSAHFNRSMRALAKTKGMSLSEHALSTAVPGRVLPTPTEKDVFRLLGL
PYREPAERDW
Ligand information
>7m4e Chain D (length=4) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
gccg
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
7m4e
Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Resolution
1.903 Å
Binding residue
(original residue number in PDB)
Y267 W274 R275 Y279 P303 G304 G306 M309 K312
Binding residue
(residue number reindexed from 1)
Y17 W24 R25 Y29 P53 G54 G56 M59 K62
Enzymatic activity
Enzyme Commision number
2.7.7.7
: DNA-directed DNA polymerase.
4.2.99.-
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003887
DNA-directed DNA polymerase activity
GO:0016779
nucleotidyltransferase activity
GO:0034061
DNA polymerase activity
Biological Process
GO:0006281
DNA repair
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:7m4e
,
PDBe:7m4e
,
PDBj:7m4e
PDBsum
7m4e
PubMed
35680862
UniProt
Q9UGP5
|DPOLL_HUMAN DNA polymerase lambda (Gene Name=POLL)
[
Back to BioLiP
]