Structure of PDB 7lxh Chain A Binding Site BS03

Receptor Information
>7lxh Chain A (length=227) Species: 1396 (Bacillus cereus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VPMHPFVKALQEHFTAHQNPEKAEPMARYMKNHFLFLGIQTPERRQLLKD
IIQIHTLPDQKDFQIIIRELWDLPEREFQAAALDIMQKYKKHINETHIPF
LEELIVTKSWWDSVDSIVPTFLGDIFLKHPELISAYIPKWIASDNIWLQR
AAILFQLKYKQKMDEELLFWIIGQLHSSKEFFIQKAIGWVLREYAKTNPD
VVWEYVQNNELAPLSKREAIKHIKQNY
Ligand information
Ligand IDYNG
InChIInChI=1S/C42H38N12O8/c1-16-11-45-30-25(55)10-24-27(26(16)30)17(12-51-15-48-38(43)31-39(51)47-14-46-31)13-54(24)41(59)23-9-20-18-4-6-52(32(18)34(56)36(61-2)28(20)50-23)40(58)22-8-21-19-5-7-53(42(44)60)33(19)35(57)37(62-3)29(21)49-22/h8-11,14-15,17,45,49-50,55-57H,4-7,12-13,43H2,1-3H3,(H2,44,60)/t17-/m1/s1
InChIKeyNZVDCTGEHMJZMN-QGZVFWFLSA-N
SMILES
SoftwareSMILES
CACTVS 3.385COc1c(O)c2N(CCc2c3cc([nH]c13)C(=O)N4CCc5c6cc([nH]c6c(OC)c(O)c45)C(=O)N7C[C@@H](Cn8cnc(N)c9ncnc89)c%10c7cc(O)c%11[nH]cc(C)c%10%11)C(N)=O
OpenEye OEToolkits 2.0.7Cc1c[nH]c2c1c3c(cc2O)N(CC3Cn4cnc(c-5ncnc45)N)C(=O)c6cc7c8c(c(c(c7[nH]6)OC)O)N(CC8)C(=O)c9cc1c2c(c(c(c1[nH]9)OC)O)N(CC2)C(=O)N
CACTVS 3.385COc1c(O)c2N(CCc2c3cc([nH]c13)C(=O)N4CCc5c6cc([nH]c6c(OC)c(O)c45)C(=O)N7C[CH](Cn8cnc(N)c9ncnc89)c%10c7cc(O)c%11[nH]cc(C)c%10%11)C(N)=O
ACDLabs 12.01NC=1N=CN(CC2CN(c3cc(O)c4[NH]cc(C)c4c32)C(=O)c2cc3c([NH]2)c(OC)c(O)c2c3CCN2C(=O)c2[NH]c3c(OC)c(O)c4c(CCN4C(N)=O)c3c2)C2=NC=NC2=1
OpenEye OEToolkits 2.0.7Cc1c[nH]c2c1c3c(cc2O)N(C[C@H]3Cn4cnc(c-5ncnc45)N)C(=O)c6cc7c8c(c(c(c7[nH]6)OC)O)N(CC8)C(=O)c9cc1c2c(c(c(c1[nH]9)OC)O)N(CC2)C(=O)N
FormulaC42 H38 N12 O8
Name7-{7-[(1R)-1-{[(4P)-6-amino-3H-purin-3-yl]methyl}-5-hydroxy-8-methyl-1,6-dihydropyrrolo[3,2-e]indole-3(2H)-carbonyl]-4-hydroxy-5-methoxy-1,6-dihydropyrrolo[3,2-e]indole-3(2H)-carbonyl}-4-hydroxy-5-methoxy-1,6-dihydropyrrolo[3,2-e]indole-3(2H)-carboxamide
ChEMBL
DrugBank
ZINC
PDB chain7lxh Chain B Residue 102 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7lxh Structural evolution of a DNA repair self-resistance mechanism targeting genotoxic secondary metabolites.
Resolution1.667 Å
Binding residue
(original residue number in PDB)
Y27 W109 K156 K194
Binding residue
(residue number reindexed from 1)
Y29 W111 K158 K196
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:7lxh, PDBe:7lxh, PDBj:7lxh
PDBsum7lxh
PubMed34836957
UniProtQ816E8

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