Structure of PDB 7k7m Chain A Binding Site BS03

Receptor Information
>7k7m Chain A (length=756) Species: 246196 (Mycolicibacterium smegmatis MC2 155) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MFAWWGRTVYQFRYIVIGVMVALCLGGGVYGISLGNHVTQSGFYDEGSQS
VAASLIGDEVYGRDRTSHVVAILTPPDDKKVTDKAWQKKVTEELDQVVKD
HEDQIVGWVGWLKAPDTTDPTVSAMKTQDLRHTFISIPLQGDDDDEILKN
YQVVEPELQQVNGGDIRLAGLNPLASELTGTIGEDQKRAEVAAIPLVAVV
LFFVFGTVIAAALPAIIGGLAIAGALGIMRLVAEFTPVHFFAQPVVTLIG
LGIAIDYGLFIVSRFREEIAEGYDTEAAVRRTVMTSGRTVVFSAVIIVAS
SVPLLLFPQGFLKSITYAIIASVMLAAILSITVLAAALAILGPRVDALGV
TTLLKIPFLANWQFSRRIIDWFAEKTQKTKTREEVERGFWGRLVNVVMKR
PIAFAAPILVVMVLLIIPLGQLSLGGISEKYLPPDNAVRQSQEQFDKLFP
GFRTEPLTLVMKREDGEPITDAQIADMRAKALTVSGFTDPDNDPEKMWKE
RPANDSGSKDPSVRVIQNGLENRNDAAKKIDELRALQPPHGIEVFVGGTP
ALEQDSIHSLFDKLPLMALILIVTTTVLMFLAFGSVVLPIKAALMSALTL
GSTMGILTWMFVDGHGSGLMNYTPQPLMAPMIGLIIAVIWGLSTDYEVFL
VSRMVEARERGMSTAEAIRIGTATTGRLITGAALILAVVAGAFVFSDLVM
MKYLAFGLLIALLLDATIIRMFLVPAVMKLLGDDCWWAPRWMKRVQEKLG
LGETEL
Ligand information
Ligand IDU2D
InChIInChI=1S/C16H30O7/c1-2-3-4-5-6-7-8-9-12(17)22-10-11-13(18)14(19)15(20)16(21)23-11/h11,13-16,18-21H,2-10H2,1H3/t11-,13-,14+,15-,16+/m1/s1
InChIKeyWVGXAJWVJXKEID-JZYAIQKZSA-N
SMILES
SoftwareSMILES
CACTVS 3.385CCCCCCCCCC(=O)OC[C@H]1O[C@H](O)[C@H](O)[C@@H](O)[C@@H]1O
CACTVS 3.385CCCCCCCCCC(=O)OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
ACDLabs 12.01C1(C(C(O)C(C(O1)COC(CCCCCCCCC)=O)O)O)O
OpenEye OEToolkits 2.0.7CCCCCCCCCC(=O)OCC1C(C(C(C(O1)O)O)O)O
OpenEye OEToolkits 2.0.7CCCCCCCCCC(=O)OC[C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)O)O)O)O
FormulaC16 H30 O7
Name6-O-decanoyl-alpha-D-glucopyranose
ChEMBL
DrugBank
ZINC
PDB chain7k7m Chain D Residue 1 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7k7m Structures of the mycobacterial membrane protein MmpL3 reveal its mechanism of lipid transport.
Resolution3.33 Å
Binding residue
(original residue number in PDB)
V51 D58 T549
Binding residue
(residue number reindexed from 1)
V51 D58 T549
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology

View graph for
Cellular Component
External links
PDB RCSB:7k7m, PDBe:7k7m, PDBj:7k7m
PDBsum7k7m
PubMed34383749
UniProtA0QP27|MMPL3_MYCS2 Trehalose monomycolate exporter MmpL3 (Gene Name=mmpL3)

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