Structure of PDB 7elc Chain A Binding Site BS03

Receptor Information
>7elc Chain A (length=1409) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DEYVQELKGLIRKHRCEFGHQKSPLLTEGFKLLSSLVELESCEAHACQAN
TDQRFVDVILSDNGILCPTLPKVIPDGFKLTGKTLILLETFVRVNPDEFE
KKWKADMSKLLNLKHDLQKSGVTLVPIVDGRSNYNNRFVADWVIERIRWL
LIEILKASEDQEYQRLIHSLSNVKLENLEHLKRNSLDYDERLNESLFIGL
KGDIRESTVREELIKLKLWFKDEVFSKGLGKFKLTDRRELLESLSSLGAH
LDSDVSSCPFCNNKLMEIVYNVTFSCVERTDTHSNIEKHYLSVLSLCNKI
KGLKVFNTRRNTLLFLDLIMVNLMVDISDSCQDAIESLRKSGLIVGQMVM
LVNDRVLDILEAVKLIRKKIGTNPNWVKNCSKILERSHPEIWHHLSTLIK
QPDFNSLISIAQHLVSDRPIMRYSVKICRHKLFQEMSSFEQMRLFKTLSS
ISLSLINSMKTSFSSRLLVNEKYFGNVRLRECYAQRFYLAESLVGFLFYQ
KTGERSRCYSVYLSDNGVMSEQGSFYCDPKRFFLPVFSDEVLAGMCEEMT
SWLDFDTGLMNDTGPILRLLVLAILCSPSKRNQTFLQGLRYFLMAFANQI
HHIDLTSKLVVECKSSSEVVVQRLAVGLFIRLLSGESDASLFFSRRFKYL
LNVSYLCHLITKETPDRLTDQIKCFEKFIEPKVKFGCAVVNPSLNGKLTV
DQEDIMINGLKKFFSKSLRDTEDVQTPGVCKELLNYCVSLFNRGKLKVSG
ELKNNPFRSPTEFTSISSNSGNLKFGLSYKEQVGSNRELYVGDLNTKLMT
RLVEDFSEAVGNSMKYTCLNSEKEFERAICDMKMAVNNGDLSCSYDHSKW
GPTMSPALFLALLQMLELRTPVDRSKIDLDSVKSILKWHLHKVVEVPINV
AEAYCIGSTSLSEEFFHQTMQLNGQIPSHIMSVLDMGQGILHNTSDLYGL
ITEQFLCYALDLLYDVIPVSYTSSDDQITLIKTPSDAAEWLEMICFHEFL
SSKLNKFVSPKSVIGTFVAEFKSRFFVMGEETPLLTKFVAAALHNVKCKT
PTQLSETIDTICDQCIANGVSTKIVTRISKRVNQLIRYSGYGETPFGAIE
DQDVKDWVDGSRGYRLQRKIEAIFHDDKETSFIRNCARKVFNDIKRGRIF
EENLINLIGRGGDEALTGFLQYAGCSEQEVNRVLNYRWVNLSSFGDLRLV
LRVPTLIKTLQSKLSRQSSVASGFIGFCKSMGSKCVRDGKGGFLYIKEVY
SGVSACTCEICALKPKIIYCNNSLNKVSQFSKPILWDYFSLVLTNACELG
EWVFSTVKEPQNNQNFFWAVKPKVVRQIEDGMNHVLQSIRRNYPVLFDEH
LTPFMNDLQVSRLKFLDVCIALDMMNENLGIISHLLKTRDNSVYIVKQSD
CALAHIRQS
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain7elc Chain A Residue 2302 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7elc Cryo-EM structures of Lassa and Machupo virus polymerases complexed with cognate regulatory Z proteins identify targets for antivirals.
Resolution3.1 Å
Binding residue
(original residue number in PDB)		C284 C287 C470 H472
Binding residue
(residue number reindexed from 1)		C258 C261 C428 H430
Annotation score1
Enzymatic activity
Enzyme Commision number 2.7.7.48: RNA-directed RNA polymerase.
3.1.-.-
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0003968 RNA-dependent RNA polymerase activity
GO:0016787 hydrolase activity
GO:0046872 metal ion binding
Biological Process
GO:0001172 RNA-templated transcription
GO:0019079 viral genome replication
GO:0039689 negative stranded viral RNA replication
GO:0039694 viral RNA genome replication
GO:0039696 RNA-templated viral transcription
GO:0075526 cap snatching
Cellular Component
GO:0030430 host cell cytoplasm
GO:0044423 virion component

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Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7elc, PDBe:7elc, PDBj:7elc
PDBsum7elc
PubMed34127846
UniProtQ6IVU0

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