Structure of PDB 7duz Chain A Binding Site BS03
Receptor Information
>7duz Chain A (length=231) Species:
287
(Pseudomonas aeruginosa) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
EYPTVSEIPVGEVRLYQIADGVWSHIATQSFDGAVYPSNGLIVRDGDELL
LIDTAWGAKNTAALLAEIEKQIGLPVTRAVSTHFHDDRVGGVDVLRAAGV
ATYASPSTRRLAEVEGNEIPTHSLEGLSSSGDAVRFGPVELFYPGAAHST
DNLVVYVPSASVLYGGCAIYELSRTSAGNVADADLAEWPTSIERIQQHYP
EAQFVIPGHGLPGGLDLLKHTTNVVKAHTNR
Ligand information
Ligand ID
HM0
InChI
InChI=1S/C8H10N2O2/c11-8(12)7-9-4-5-10(7)6-2-1-3-6/h4-6H,1-3H2,(H,11,12)
InChIKey
NZCLFPVXVQMPNV-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 2.0.7
c1cn(c(n1)C(=O)O)C2CCC2
CACTVS 3.385
OC(=O)c1nccn1C2CCC2
Formula
C8 H10 N2 O2
Name
1-cyclobutylimidazole-2-carboxylic acid
ChEMBL
CHEMBL5181819
DrugBank
ZINC
PDB chain
7duz Chain A Residue 304 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
7duz
Structure-guided optimization of 1H-imidazole-2-carboxylic acid derivatives affording potent VIM-Type metallo-beta-lactamase inhibitors.
Resolution
1.6 Å
Binding residue
(original residue number in PDB)
Y67 W87 D118 H179 C198 N210 H240
Binding residue
(residue number reindexed from 1)
Y36 W56 D87 H148 C167 N179 H209
Annotation score
1
Enzymatic activity
Enzyme Commision number
3.5.2.6
: beta-lactamase.
Gene Ontology
Molecular Function
GO:0016787
hydrolase activity
GO:0046872
metal ion binding
Biological Process
GO:0017001
antibiotic catabolic process
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:7duz
,
PDBe:7duz
,
PDBj:7duz
PDBsum
7duz
PubMed
34763944
UniProt
Q9K2N0
[
Back to BioLiP
]