Structure of PDB 6zai Chain A Binding Site BS03
Receptor Information
>6zai Chain A (length=328) Species:
227321
(Aspergillus nidulans FGSC A4) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
VSKANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGINVQR
LSQKTKEFHMSITPEEKWDLAIRAYNKEHQDQVRAGYYLSIPGKKAVESF
CYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLS
SALLKGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTA
ADGTKLSFEWHEDVSLITVLYQSNVQNLQVETAAGYQDIEADDTGYLINC
GSYMAHLTNNYYKAPIHRVKWVNAERQSLPFFVNLGYDSVIDPFDPREPN
GKSDREPLSYGDYLQNGLVSLINKNGQT
Ligand information
Ligand ID
FE2
InChI
InChI=1S/Fe/q+2
InChIKey
CWYNVVGOOAEACU-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Fe+2]
CACTVS 3.341
[Fe++]
Formula
Fe
Name
FE (II) ION
ChEMBL
DrugBank
DB14510
ZINC
PDB chain
6zai Chain A Residue 405 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6zai
X-ray free-electron laser studies reveal correlated motion during isopenicillin N synthase catalysis.
Resolution
1.5501 Å
Binding residue
(original residue number in PDB)
H214 D216 H270
Binding residue
(residue number reindexed from 1)
H211 D213 H267
Annotation score
1
Enzymatic activity
Enzyme Commision number
1.21.3.1
: isopenicillin-N synthase.
Gene Ontology
Molecular Function
GO:0005506
iron ion binding
GO:0016216
isopenicillin-N synthase activity
GO:0016491
oxidoreductase activity
GO:0031418
L-ascorbic acid binding
GO:0046872
metal ion binding
Biological Process
GO:0009058
biosynthetic process
GO:0017000
antibiotic biosynthetic process
GO:0042318
penicillin biosynthetic process
GO:0044283
small molecule biosynthetic process
Cellular Component
GO:0005737
cytoplasm
GO:0005829
cytosol
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:6zai
,
PDBe:6zai
,
PDBj:6zai
PDBsum
6zai
PubMed
34417180
UniProt
P05326
|IPNA_EMENI Isopenicillin N synthase (Gene Name=ipnA)
[
Back to BioLiP
]