Structure of PDB 6via Chain A Binding Site BS03
Receptor Information
>6via Chain A (length=176) Species:
266264
(Cupriavidus metallidurans CH34) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
RHMLTYGAPFNFPRWIDEHAHLLKPPVGNRQVWQDSDFIVTVVGGPNHRT
DYHDDPLEEFFYQLRGNAYLNLWVDGRRERADLKEGDIFLLPPHVRHSPQ
RPEAGSACLVIERQRPAGMLDGFEWYCDACGHLVHRVEVQLKSIVTDLPP
LFESFYASEDKRRCPHCGQVHPGRAA
Ligand information
Ligand ID
EAY
InChI
InChI=1S/C7H7NO4/c8-5-4(6(9)10)2-1-3-12-7(5)11/h1-3,7-8,11H,(H,9,10)/b8-5+/t7-/m1/s1
InChIKey
UYPQDLOIVBUHNZ-KBUNYLKBSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 2.0.6
[H]/N=C\1/[C@@H](OC=CC=C1C(=O)O)O
CACTVS 3.385
O[CH]1OC=CC=C(C(O)=O)C1=N
CACTVS 3.385
O[C@@H]1OC=CC=C(C(O)=O)C1=N
ACDLabs 12.01
[N@H]=C1C(C(O)=O)=CC=COC1O
OpenEye OEToolkits 2.0.6
C1=COC(C(=N)C(=C1)C(=O)O)O
Formula
C7 H7 N O4
Name
(2R,3E)-2-hydroxy-3-imino-2,3-dihydrooxepine-4-carboxylic acid
ChEMBL
DrugBank
ZINC
PDB chain
6via Chain A Residue 206 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6via
Observing 3-hydroxyanthranilate-3,4-dioxygenase in action through a crystalline lens.
Resolution
1.591 Å
Binding residue
(original residue number in PDB)
V41 H51 E57 F59 P97 R99 E110
Binding residue
(residue number reindexed from 1)
V43 H53 E59 F61 P99 R101 E112
Annotation score
1
Enzymatic activity
Enzyme Commision number
1.13.11.6
: 3-hydroxyanthranilate 3,4-dioxygenase.
Gene Ontology
Molecular Function
GO:0000334
3-hydroxyanthranilate 3,4-dioxygenase activity
GO:0005506
iron ion binding
GO:0008198
ferrous iron binding
GO:0046872
metal ion binding
GO:0051213
dioxygenase activity
Biological Process
GO:0006569
tryptophan catabolic process
GO:0009435
NAD biosynthetic process
GO:0019363
pyridine nucleotide biosynthetic process
GO:0019805
quinolinate biosynthetic process
GO:0034354
'de novo' NAD biosynthetic process from tryptophan
GO:0043420
anthranilate metabolic process
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:6via
,
PDBe:6via
,
PDBj:6via
PDBsum
6via
PubMed
32732435
UniProt
Q1LCS4
|3HAO_CUPMC 3-hydroxyanthranilate 3,4-dioxygenase (Gene Name=nbaC)
[
Back to BioLiP
]