Structure of PDB 6u9v Chain A Binding Site BS03
Receptor Information
>6u9v Chain A (length=560) Species:
10116
(Rattus norvegicus) [
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CCSWNDVFQYETNKVTRIQSVNYGTIKWILHMTVFSYVSFALMSDKLYQR
KEPLISSVHTKVKGVAEVTENVTKLVHGIFDTADYTLPLQGNSFFVMTNY
LKSEGQEQKLCPEYPSRGKQCHSDQGCIKGWMDPQSKGIQTGRCIPYDQK
RKTCEIFAWCPAEEGKEAPRPALLRSAENFTVLIKNNIDFPGHNYTTRNI
LPGMNISCTFHKTWNPQCPIFRLGDIFQEIGENFTEVAVQGGIMGIEIYW
DCNLDSWSHRCQPKYSFRRLDDKYTNESLFPGYNFRYAKYYKENGMEKRT
LIKAFGVRFDILVFGTGGKFDIIQLVVYIGSTLSYFGLATVCIDLIINTY
ASTCCRSRVYPSCKCCEPCAVNEYYYRKKCEPIVEPKPTLKYVSFVDEPH
IWMVDQQLLGKSLQDVKGQEVPRPQTDFLELSRLSRDSPDWCQCGNCLPS
QLPENRRALEELCCRRKPGQCITTSELFSKIVLSREALQLLLLYQEPLLA
LEGEAINSKLRHCAYRSYATWRFVSQDMADFAILPSCCRWKIRKEFPKTQ
GQYSGFKYPY
Ligand information
Ligand ID
ZN
InChI
InChI=1S/Zn/q+2
InChIKey
PTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
Formula
Zn
Name
ZINC ION
ChEMBL
CHEMBL1236970
DrugBank
DB14532
ZINC
PDB chain
6u9v Chain A Residue 702 [
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Receptor-Ligand Complex Structure
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PDB
6u9v
Full-Length P2X7Structures Reveal How Palmitoylation Prevents Channel Desensitization.
Resolution
2.9 Å
Binding residue
(original residue number in PDB)
C479 C499 C572
Binding residue
(residue number reindexed from 1)
C444 C464 C537
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000287
magnesium ion binding
GO:0001530
lipopolysaccharide binding
GO:0001614
purinergic nucleotide receptor activity
GO:0004931
extracellularly ATP-gated monoatomic cation channel activity
GO:0005102
signaling receptor binding
GO:0005216
monoatomic ion channel activity
GO:0005507
copper ion binding
GO:0005515
protein binding
GO:0005524
ATP binding
GO:0008270
zinc ion binding
GO:0015267
channel activity
GO:0038023
signaling receptor activity
GO:0042802
identical protein binding
GO:0043539
protein serine/threonine kinase activator activity
GO:0097110
scaffold protein binding
Biological Process
GO:0000165
MAPK cascade
GO:0000902
cell morphogenesis
GO:0001845
phagolysosome assembly
GO:0001913
T cell mediated cytotoxicity
GO:0001916
positive regulation of T cell mediated cytotoxicity
GO:0002028
regulation of sodium ion transport
GO:0006509
membrane protein ectodomain proteolysis
GO:0006649
phospholipid transfer to membrane
GO:0006811
monoatomic ion transport
GO:0006812
monoatomic cation transport
GO:0006816
calcium ion transport
GO:0006884
cell volume homeostasis
GO:0006900
vesicle budding from membrane
GO:0006954
inflammatory response
GO:0007005
mitochondrion organization
GO:0007009
plasma membrane organization
GO:0007166
cell surface receptor signaling pathway
GO:0009306
protein secretion
GO:0009410
response to xenobiotic stimulus
GO:0009612
response to mechanical stimulus
GO:0009617
response to bacterium
GO:0010043
response to zinc ion
GO:0010467
gene expression
GO:0010524
positive regulation of calcium ion transport into cytosol
GO:0010628
positive regulation of gene expression
GO:0012501
programmed cell death
GO:0014047
glutamate secretion
GO:0014049
positive regulation of glutamate secretion
GO:0014051
gamma-aminobutyric acid secretion
GO:0014054
positive regulation of gamma-aminobutyric acid secretion
GO:0014070
response to organic cyclic compound
GO:0016079
synaptic vesicle exocytosis
GO:0016485
protein processing
GO:0017121
plasma membrane phospholipid scrambling
GO:0019228
neuronal action potential
GO:0019233
sensory perception of pain
GO:0030163
protein catabolic process
GO:0030501
positive regulation of bone mineralization
GO:0032060
bleb assembly
GO:0032308
positive regulation of prostaglandin secretion
GO:0032310
prostaglandin secretion
GO:0032496
response to lipopolysaccharide
GO:0032730
positive regulation of interleukin-1 alpha production
GO:0032731
positive regulation of interleukin-1 beta production
GO:0032755
positive regulation of interleukin-6 production
GO:0032963
collagen metabolic process
GO:0033198
response to ATP
GO:0034220
monoatomic ion transmembrane transport
GO:0034405
response to fluid shear stress
GO:0034767
positive regulation of monoatomic ion transmembrane transport
GO:0035590
purinergic nucleotide receptor signaling pathway
GO:0042098
T cell proliferation
GO:0043029
T cell homeostasis
GO:0043065
positive regulation of apoptotic process
GO:0043132
NAD transport
GO:0043409
negative regulation of MAPK cascade
GO:0043410
positive regulation of MAPK cascade
GO:0045332
phospholipid translocation
GO:0045778
positive regulation of ossification
GO:0045779
negative regulation of bone resorption
GO:0045794
negative regulation of cell volume
GO:0045821
positive regulation of glycolytic process
GO:0046513
ceramide biosynthetic process
GO:0046931
pore complex assembly
GO:0048705
skeletal system morphogenesis
GO:0048873
homeostasis of number of cells within a tissue
GO:0050714
positive regulation of protein secretion
GO:0050830
defense response to Gram-positive bacterium
GO:0051209
release of sequestered calcium ion into cytosol
GO:0051495
positive regulation of cytoskeleton organization
GO:0051592
response to calcium ion
GO:0051602
response to electrical stimulus
GO:0051649
establishment of localization in cell
GO:0051882
mitochondrial depolarization
GO:0051899
membrane depolarization
GO:0051901
positive regulation of mitochondrial depolarization
GO:0060079
excitatory postsynaptic potential
GO:0060907
positive regulation of macrophage cytokine production
GO:0070227
lymphocyte apoptotic process
GO:0070230
positive regulation of lymphocyte apoptotic process
GO:0070231
T cell apoptotic process
GO:0070234
positive regulation of T cell apoptotic process
GO:0070588
calcium ion transmembrane transport
GO:0071359
cellular response to dsRNA
GO:0071407
cellular response to organic cyclic compound
GO:0072593
reactive oxygen species metabolic process
GO:0097190
apoptotic signaling pathway
GO:0097191
extrinsic apoptotic signaling pathway
GO:0098655
monoatomic cation transmembrane transport
GO:0099161
regulation of presynaptic dense core granule exocytosis
GO:1904172
positive regulation of bleb assembly
GO:1904669
ATP export
Cellular Component
GO:0005635
nuclear envelope
GO:0005737
cytoplasm
GO:0005739
mitochondrion
GO:0005886
plasma membrane
GO:0005911
cell-cell junction
GO:0009897
external side of plasma membrane
GO:0016020
membrane
GO:0031594
neuromuscular junction
GO:0032059
bleb
GO:0032991
protein-containing complex
GO:0043025
neuronal cell body
GO:0043195
terminal bouton
GO:0045202
synapse
GO:0098794
postsynapse
View graph for
Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:6u9v
,
PDBe:6u9v
,
PDBj:6u9v
PDBsum
6u9v
PubMed
31587896
UniProt
Q64663
|P2RX7_RAT P2X purinoceptor 7 (Gene Name=P2rx7)
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