Structure of PDB 6tta Chain A Binding Site BS03
Receptor Information
>6tta Chain A (length=227) Species:
573
(Klebsiella pneumoniae) [
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DQRFGDLVFRQLAPNVWQHTSYLDMPGFGAVASNGLIVRDGGRVLVVDTA
WTDDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAAGIATYAN
ALSNQLAPQEGMVAAQHSLTFAANGWVEPATAPNFGPLKVFYPGPGHTSD
NITVGIDGTDIAFGGCLIKDSKAKSLGNLGDADTEHYAASARAFGAAFPK
ASMIVMSHSAPDSRAAITHTARMADKL
Ligand information
Ligand ID
QUE
InChI
InChI=1S/C15H10O7/c16-7-4-10(19)12-11(5-7)22-15(14(21)13(12)20)6-1-2-8(17)9(18)3-6/h1-5,16-19,21H
InChIKey
REFJWTPEDVJJIY-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
Oc1cc(O)c2C(=O)C(=C(Oc2c1)c3ccc(O)c(O)c3)O
OpenEye OEToolkits 1.5.0
c1cc(c(cc1C2=C(C(=O)c3c(cc(cc3O2)O)O)O)O)O
ACDLabs 10.04
O=C1c3c(OC(=C1O)c2ccc(O)c(O)c2)cc(O)cc3O
Formula
C15 H10 O7
Name
3,5,7,3',4'-PENTAHYDROXYFLAVONE;
QUERCETIN
ChEMBL
CHEMBL50
DrugBank
DB04216
ZINC
ZINC000003869685
PDB chain
6tta Chain A Residue 303 [
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Receptor-Ligand Complex Structure
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PDB
6tta
NMR Characterization of the Influence of Zinc(II) Ions on the Structural and Dynamic Behavior of the New Delhi Metallo-beta-Lactamase-1 and on the Binding with Flavonols as Inhibitors.
Resolution
N/A
Binding residue
(original residue number in PDB)
M67 F70 H122 D124 H189 H250
Binding residue
(residue number reindexed from 1)
M25 F28 H80 D82 H147 H208
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
H120 H122 D124 H189 C208 K211 N220 H250
Catalytic site (residue number reindexed from 1)
H78 H80 D82 H147 C166 K169 N178 H208
Enzyme Commision number
3.5.2.6
: beta-lactamase.
External links
PDB
RCSB:6tta
,
PDBe:6tta
,
PDBj:6tta
PDBsum
6tta
PubMed
32426604
UniProt
E9NWK5
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