Structure of PDB 6t6v Chain A Binding Site BS03

Receptor Information
>6t6v Chain A (length=742) Species: 85698 (Achromobacter xylosoxidans) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GPYRRLWFTLIAVLAVTFALLGFYGGEVYRQAPPIPEEVASADGTRLFGR
DDILDGQTAWQSIGGMQLGSIWGHGAYQAPDWTADWLHRELMAWLDLAAR
DAHGRDYGQLDAPAQAALREQLKAEYRANRADAAGGKLTLSPRRAQAVAQ
TEAYYDQLFSDAPALHRSRENYAMKENTLPDANRRRQMTHFFFWTAWAAG
TEREGTSVTYTNNWPHEPLIGNHPSSENVMWSIISVVVLLAGIGLLIWAW
AFLRGKEEDEPPAPARDPLTTFALTPSQRALGKYLFLVVALFGFQVLLGG
FTAHYTVEGQKFYGIDLSQWFPYSLVRTWHIQSALFWIATGFLAAGLFLA
PLINGGRDPKYQKAGVDILFWALVLVVVGSFAGNYLAIAQIMPPDLNFWL
GHQGYEYVDLGRLWQIGKFAGICFWLVLMLRGIVPALRTPGGDKNLLALL
TASVGAIGLFYGAGFFYGERTHLTVMEYWRWWIVHLWVEGFFAVFATTAL
AFIFSTLGLVSRRMATTASLASASLFMLGGIPGTFHHLYFAGTTTPVMAV
GASFSALEVVPLIVLGHEAWENWRLKTRAPWMENLKWPLMCFVAVAFWNM
LGAGVFGFMINPPVSLYYIQGLNTTPVHAHAALFGVYGFLALGFTLLVLR
YIRPQYALSPGLMKLAFWGLNLGLALMIFTSLLPIGLIQFHASVSEGMWY
ARSEAFMQQDILKTLRWGRTFGDVVFLLGALAMVVQVILGLL
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain6t6v Chain A Residue 803 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6t6v The active form of quinol-dependent nitric oxide reductase fromNeisseria meningitidisis a dimer.
Resolution4.5 Å
Binding residue
(original residue number in PDB)		G76 Y78 E407
Binding residue
(residue number reindexed from 1)		G75 Y77 E406
Annotation score1
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Sun Dec 1 20:35:52 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '6t6v', asym_id = 'A', bs = 'BS03', title = 'The active form of quinol-dependent nitric oxide reductase fromNeisseria meningitidisis a dimer.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='6t6v', asym_id='A', bs='BS03', title='The active form of quinol-dependent nitric oxide reductase fromNeisseria meningitidisis a dimer.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0004129,0009060,0016020,0020037', uniprot = '', pdbid = '6t6v', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0004129,0009060,0016020,0020037', uniprot='', pdbid='6t6v', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>