Structure of PDB 6t5e Chain A Binding Site BS03

Receptor Information
>6t5e Chain A (length=439) Species: 380242 (Candidatus Brocadia fulgida) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
YTKPDYVDGRGPYKSFLKFLPSIRWYDPEHYWTNGSQNEGVFKNEECVLC
HTVQTPTIVKDWKKSAHGNLEMRRGLGVKGKDGKPVEGTVGCDACHGNDH
QKLFMPTYKNCGECHPRETSEHRSGGLGSHTHAYTVNVLEFSWHVGKPAE
EVAGCAECHAIVENRCDGCHTRHVFSPAEARKPTACRYCHMDEWAMYNTS
VHGCLYEAESATMDWSKPSKKGNYRVPTCAYCHMQDGNHNPHKAKRDAWI
KKCQDCHSPRFAADKLKEMDAGVNLSFTKWREAAAVIVGCFLDGVVDPMP
EGSPPDWYGHYTFSLLPGGDPRFYATSNLERLGLEMICYLTGNVYKAYAH
MSMYNQTYGNGSAFEQDRKLVEIKTEAAKLRRFAAIEKKIGLEHKSEGFW
QHGEYLDLLPGWIRKPGDVDVEWFKRTDIPHRANADAGV
Ligand information
Ligand IDHEC
InChIInChI=1S/C34H34N4O4.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,9-12H2,1-6H3,(H,39,40)(H,41,42);/q-4;+4/b21-7?,22-8?,26-13-,29-14-,30-15-,31-16-;
InChIKeyHXQIYSLZKNYNMH-LJNAALQVSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04O=C(O)CCC1=C(C2=CC6=C(C(=C/C)\C5=CC4=C(C(\C3=Cc7c(c(c8C=C1N2[Fe](N34)(N56)n78)CCC(=O)O)C)=C/C)C)C)C
OpenEye OEToolkits 1.5.0CC=C1C(=C2C=C3C(=CC)C(=C4N3[Fe]56N2C1=Cc7n5c(c(c7C)CCC(=O)O)C=C8N6C(=C4)C(=C8CCC(=O)O)C)C)C
CACTVS 3.341C\C=C1/C(=C2C=C3N4C(=Cc5n6c(C=C7N8C(=C(C)\C7=C/C)C=C1N2[Fe@@]468)c(C)c5CCC(O)=O)C(=C3C)CCC(O)=O)C
CACTVS 3.341CC=C1C(=C2C=C3N4C(=Cc5n6c(C=C7N8C(=C(C)C7=CC)C=C1N2[Fe]468)c(C)c5CCC(O)=O)C(=C3C)CCC(O)=O)C
FormulaC34 H34 Fe N4 O4
NameHEME C
ChEMBL
DrugBank
ZINC
PDB chain6t5e Chain A Residue 603 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6t5e Purification of the key enzyme complexes of the anammox pathway from DEMON sludge.
Resolution3.3 Å
Binding residue
(original residue number in PDB)		H133 R139 R140 G141 L142 V144 V156 C177 C180 H181 F241 P243
Binding residue
(residue number reindexed from 1)		H67 R73 R74 G75 L76 V78 V90 C111 C114 H115 F175 P177
Annotation score4
Enzymatic activity
Catalytic site (original residue number in PDB) H225 Y449
Catalytic site (residue number reindexed from 1) H159 Y358
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:6t5e, PDBe:6t5e, PDBj:6t5e
PDBsum6t5e
PubMed33798263
UniProtA0A0M2UZI7

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