Structure of PDB 6rjy Chain A Binding Site BS03

Receptor Information

>6rjy Chain A (length=415) Species: 1422 (Geobacillus stearothermophilus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

KIELTFMFRGQPQEQTAYKNVVKKFEEKHPNVKVNIVVTSPDQYATKLRA
AIAGRKIPDVFYFNPGELRAYVNSNVLLDITKYVENSKGVNLQDIWEKGV
NKYRFDGEKVGQGNLYGLPKDLGPFALGYNKTMFEKAGIPLPDKDKPYTW
QEFIDVCKKLTKDTNGDGKLDQWGTGLNATWTLQGFVWSNGADWIDESKT
KVTVDDPKFIEALQFFADMQNKYKVTPSIAEAQTLDTYQRWLRGQLGFFP
VGPWDLAAFDQQIKFEYDLIPWPAGSTGKPATWVGSLGIGVSSMTKHPKE
AVELALYLSADPEGQKALVDQRVQLPNSVKVAEEWAKDPSIKPANKQEFL
DIINDYGHSFPTEYTYNGEWYDEFYRNLQPVLDGKMSAEEYVKKAKPKMQ
KLLDQAIEQEKQASK

Ligand information

Ligand ID

InChI

InChI=1S/Ca/q+2

InChIKey

BHPQYMZQTOCNFJ-UHFFFAOYSA-N

SMILES

Software	SMILES
CACTVS 3.341	[Ca++]
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Ca+2]

Formula

Name

CALCIUM ION

PDB chain

6rjy Chain A Residue 504 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	6rjy Carbohydrate-Binding Capability and Functional Conformational Changes of AbnE, an Arabino-oligosaccharide Binding Protein.
Resolution	1.621 Å
Binding residue (original residue number in PDB)	D201 N203 D205 K207 D209
Binding residue (residue number reindexed from 1)	D163 N165 D167 K169 D171
Annotation score	4

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0046872	metal ion binding

View graph for
Molecular Function

External links

PDB	RCSB:6rjy, PDBe:6rjy, PDBj:6rjy
PDBsum	6rjy
PubMed	32067952
UniProt	B3EYM9

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