Structure of PDB 6pdy Chain A Binding Site BS03

Receptor Information
>6pdy Chain A (length=262) Species: 209285 (Thermochaetoides thermophila) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RTRIKAQENLRRIRRKQIDDLVLNEYENQVALEVVAPEDIPVGFNDIGGL
DDIIEELKETIIYPLTAAPSGVLLYGPPGCGKTMLAKAVAHESGASFINL
HISTLTEKWYGDSNKIVRAVFSLAKKLQPSIIFIDEIDAVLGEASGMVKA
EFMTLWDGVPNRIVVLGATNRINDIDEAILRRMPKQFPVPLPGLEQRRRI
LELVLRGTKRDPDFDLDYIARVTAGMSGSDIKETCRDAAMAPMREYIRQH
RASGKPLSEINP
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain6pdy Chain A Residue 503 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6pdy Structure of the AAA protein Msp1 reveals mechanism of mislocalized membrane protein extraction.
Resolution3.7 Å
Binding residue
(original residue number in PDB)		T161 D213
Binding residue
(residue number reindexed from 1)		T83 D135
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0016887 ATP hydrolysis activity
Biological Process
GO:0140570 extraction of mislocalized protein from mitochondrial outer membrane
Cellular Component
GO:0005741 mitochondrial outer membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6pdy, PDBe:6pdy, PDBj:6pdy
PDBsum6pdy
PubMed31999255
UniProtG0S654

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