Structure of PDB 6lam Chain A Binding Site BS03

Receptor Information
>6lam Chain A (length=277) Species: 9544 (Macaca mulatta) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AGSHSMRYFSTTVSRPGRGEPRFIVVGYVDDTQFVRFDSDAASPKMEPRA
PWMEQEGPEYWEEQTRRVKDAAQTFRVSLGNLRGYYNQSEAGSHTLQTMS
GCDLGPDGRLLRGYYQQAYDGRDYIALNEDLRSWTAADEAAQNTQRKWEA
AGVAEQWRAYLEGECLESLRRYLENGKETLQRAEPPKTHVTHHPVSDHEA
TLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPGGDGTFQKWGAVVV
PSGEEQRYTCHVQHEGLPEPLTLRWEP
Ligand information
Ligand IDEKG
InChIInChI=1S/C19H38O4/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-19(22)23-17-18(21)16-20/h18,20-21H,2-17H2,1H3/t18-/m1/s1
InChIKeyQHZLMUACJMDIAE-GOSISDBHSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.6CCCCCCCCCCCCCCCC(=O)OC[C@@H](CO)O
ACDLabs 12.01
OpenEye OEToolkits 2.0.6
CCCCCCCCCCCCCCCC(=O)OCC(CO)O
CACTVS 3.385CCCCCCCCCCCCCCCC(=O)OC[CH](O)CO
CACTVS 3.385CCCCCCCCCCCCCCCC(=O)OC[C@H](O)CO
FormulaC19 H38 O4
Name(2R)-2,3-dihydroxypropyl hexadecanoate
ChEMBL
DrugBank
ZINCZINC000032840892
PDB chain6lam Chain A Residue 311 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6lam Crystal structures of lysophospholipid-bound MHC class I molecules.
Resolution1.8 Å
Binding residue
(original residue number in PDB)
Y7 V67 A70 F74 T97 M98 S99 Q155 W156 Y159
Binding residue
(residue number reindexed from 1)
Y8 V68 A71 F75 T98 M99 S100 Q156 W157 Y160
Annotation score1
Enzymatic activity
Enzyme Commision number ?
External links