Structure of PDB 6lam Chain A Binding Site BS03
Receptor Information
>6lam Chain A (length=277) Species:
9544
(Macaca mulatta) [
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AGSHSMRYFSTTVSRPGRGEPRFIVVGYVDDTQFVRFDSDAASPKMEPRA
PWMEQEGPEYWEEQTRRVKDAAQTFRVSLGNLRGYYNQSEAGSHTLQTMS
GCDLGPDGRLLRGYYQQAYDGRDYIALNEDLRSWTAADEAAQNTQRKWEA
AGVAEQWRAYLEGECLESLRRYLENGKETLQRAEPPKTHVTHHPVSDHEA
TLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPGGDGTFQKWGAVVV
PSGEEQRYTCHVQHEGLPEPLTLRWEP
Ligand information
Ligand ID
EKG
InChI
InChI=1S/C19H38O4/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-19(22)23-17-18(21)16-20/h18,20-21H,2-17H2,1H3/t18-/m1/s1
InChIKey
QHZLMUACJMDIAE-GOSISDBHSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 2.0.6
CCCCCCCCCCCCCCCC(=O)OC[C@@H](CO)O
ACDLabs 12.01
OpenEye OEToolkits 2.0.6
CCCCCCCCCCCCCCCC(=O)OCC(CO)O
CACTVS 3.385
CCCCCCCCCCCCCCCC(=O)OC[CH](O)CO
CACTVS 3.385
CCCCCCCCCCCCCCCC(=O)OC[C@H](O)CO
Formula
C19 H38 O4
Name
(2R)-2,3-dihydroxypropyl hexadecanoate
ChEMBL
DrugBank
ZINC
ZINC000032840892
PDB chain
6lam Chain A Residue 311 [
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Receptor-Ligand Complex Structure
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PDB
6lam
Crystal structures of lysophospholipid-bound MHC class I molecules.
Resolution
1.8 Å
Binding residue
(original residue number in PDB)
Y7 V67 A70 F74 T97 M98 S99 Q155 W156 Y159
Binding residue
(residue number reindexed from 1)
Y8 V68 A71 F75 T98 M99 S100 Q156 W157 Y160
Annotation score
1
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:6lam
,
PDBe:6lam
,
PDBj:6lam
PDBsum
6lam
PubMed
32269076
UniProt
A0A1E1GJG5
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