Structure of PDB 6jon Chain A Binding Site BS03
Receptor Information
>6jon Chain A (length=280) Species:
1230469
(Nitratiruptor phage NrS-1) [
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HMIMEIPAIKALSRYAQWVIWKKERDTKIPYNPNNGKKASSTDPLAWGDI
DEAQAGLVRYGANGLGFVLTKSDPFVFIDLDHVLDENKRVKCEWARQLLK
EIKSYTEISPSGDGLHVVVSGKLPDYIKHKTKFDDGSALEVYESGRYMTI
TGEVFDGRDDIKELDLSILGEFAEHKILDDEAIIDLMKRKGQWPDAPKDG
DDWSSLDMSFANRLAFWCGKDIERMDRIFRQSPLMRQKWDRPTAGSTYGR
ITLKKACDFVDSVYDPALRNESDCPFEPYN
Ligand information
Ligand ID
MG
InChI
InChI=1S/Mg/q+2
InChIKey
JLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mg+2]
CACTVS 3.341
[Mg++]
Formula
Mg
Name
MAGNESIUM ION
ChEMBL
DrugBank
DB01378
ZINC
PDB chain
6jon Chain A Residue 403 [
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Receptor-Ligand Complex Structure
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PDB
6jon
Crystal structures of phage NrS-1 N300-dNTPs-Mg2+complex provide molecular mechanisms for substrate specificity.
Resolution
2.34 Å
Binding residue
(original residue number in PDB)
T69 D72 F74 E142
Binding residue
(residue number reindexed from 1)
T70 D73 F75 E143
Annotation score
1
Enzymatic activity
Enzyme Commision number
2.7.7.-
2.7.7.7
: DNA-directed DNA polymerase.
3.6.4.12
: DNA helicase.
External links
PDB
RCSB:6jon
,
PDBe:6jon
,
PDBj:6jon
PDBsum
6jon
PubMed
31176489
UniProt
M5AAG8
|POL_BPNNR DNA Primase-polymerase (Gene Name=28)
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