Structure of PDB 6j9y Chain A Binding Site BS03

Receptor Information

>6j9y Chain A (length=404) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

GPVIRVAGDSTAVGEGGRWMKEMVEAWGKKTGTRVEYIDSPADTNDRLAL
YQQYWAARSPDVDVYMIDVIWPGIVAPHALDLKPYLTEAELKEFFPRIVQ
NNTIRGKLTSLPFFTDAGILYYRKDLLEKYGYTSPPRTWNELEQMAERVM
EGERRAGNRDFWGFVFQGKPYEGLTCDALEWIYSHGGGRIVEPDGTISVN
NGRAALALNRAHGWVGRIAPQGVTSYAEEEARNVWQQGNSLFMRNWPYAY
ALGQAEGSPIRGKFGVTVLPKASADAPNAATLGGWQLMVSAYSRYPKEAV
DLVKYLASYEVQKDNAVRLSRLPTRPALYTDRDVLARNPWFRDLLPVFQN
AVSRPSDVAGARYNQVSEAIWTEVHSVLTGRKKGEQAVRDLEARIRRILR
HHHH

Ligand information

Ligand ID

CO3

InChI

InChI=1S/CH2O3/c2-1(3)4/h(H2,2,3,4)/p-2

InChIKey

BVKZGUZCCUSVTD-UHFFFAOYSA-L

SMILES

Software	SMILES
OpenEye OEToolkits 1.5.0	C(=O)([O-])[O-]
ACDLabs 10.04 CACTVS 3.341	[O-]C([O-])=O

Formula

C O3

Name

CARBONATE ION

PDB chain

6j9y Chain A Residue 504 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	6j9y Structural and thermodynamic correlation illuminates the selective transport mechanism of disaccharide alpha-glycosides through ABC transporter.
Resolution	1.63 Å
Binding residue (original residue number in PDB)	E375 K384 D392
Binding residue (residue number reindexed from 1)	E373 K382 D390
Annotation score	3

Enzymatic activity

Enzyme Commision number

External links

PDB	RCSB:6j9y, PDBe:6j9y, PDBj:6j9y
PDBsum	6j9y
PubMed	31608555
UniProt	Q5SLD7

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