Structure of PDB 6hq5 Chain A Binding Site BS03

Receptor Information
>6hq5 Chain A (length=376) Species: 264462 (Bdellovibrio bacteriovorus HD100) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AQSVDIHKDQIIFSEGDAGDCAYIIEKGRVLIYLTKDKEEIPLTILGEGE
IFGEMALIDNQNRSASVRALEDVRLAIVTKQQVLERVSTADKVVQLLMRV
LLKRLRRKNIGQSALDQIKLENQIFQAFQNKEFELFYQPIVNLKNKTITG
CEALLRWNSPQHGLVSPNLFIDIIENSSMVIPIGHWIINQALKDLRTIQD
QLRLNKKERMADDFMMSINISGRQFTHSDFVNNLEDLREKHDLHTQNIKL
EMTERIMMDGAIAIDALNQCRSLGYAISIDDFGTGFSGLQYLTQMPISFL
KIDRSFVMKILSDPKSKAVVSSIIHLAHAMDIEVIAEGIEHHEEALVLET
LGARFGQGYLFSKPVDLGRFLKLIKL
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain6hq5 Chain A Residue 803 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6hq5 Nucleotide signaling pathway convergence in a cAMP-sensing bacterial c-di-GMP phosphodiesterase.
Resolution2.83 Å
Binding residue
(original residue number in PDB)		E178 N245 E277 D306
Binding residue
(residue number reindexed from 1)		E152 N219 E251 D280
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:6hq5, PDBe:6hq5, PDBj:6hq5
PDBsum6hq5
PubMed31355487
UniProtQ6MLN6

[Back to BioLiP]