Structure of PDB 6fb9 Chain A Binding Site BS03
Receptor Information
>6fb9 Chain A (length=154) Species:
3055
(Chlamydomonas reinhardtii) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
NTKYNKEFLLYLAGFVDGDGSIIAQIKPNQSYKFKHQLSLTFQVTQKTQR
RWFLDKLVDEIGVGYVRDRGSVSNYILSEIKPLHNFLTQLQPFLKLKQKQ
ANLVLKIIEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKTTSETVRAV
LDAA
Ligand information
>6fb9 Chain F (length=10) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
gcagttttga
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6fb9
Understanding the indirect DNA read-out specificity of I-CreI Meganuclease.
Resolution
2.95 Å
Binding residue
(original residue number in PDB)
G19 S22 Q26 K28 N30 A133 N136 D137 S138 R141 K142
Binding residue
(residue number reindexed from 1)
G18 S21 Q25 K27 N29 A132 N135 D136 S137 R140 K141
Enzymatic activity
Catalytic site (original residue number in PDB)
G19 D20
Catalytic site (residue number reindexed from 1)
G18 D19
Enzyme Commision number
3.1.-.-
Gene Ontology
Molecular Function
GO:0004519
endonuclease activity
GO:0042802
identical protein binding
GO:0046872
metal ion binding
Biological Process
GO:0006314
intron homing
Cellular Component
GO:0009507
chloroplast
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:6fb9
,
PDBe:6fb9
,
PDBj:6fb9
PDBsum
6fb9
PubMed
29980759
UniProt
P05725
|DNE1_CHLRE DNA endonuclease I-CreI
[
Back to BioLiP
]