Structure of PDB 6d3u Chain A Binding Site BS03

Receptor Information
>6d3u Chain A (length=260) Species: 906888 (Nonlabens ulvanivorans) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QTDEDTGPVVDCTNQGTNPTRDTDIPNPRNIGDIDDRSCYANYSESSILG
KFWGIYNITDGSNHMDAPNTLQPRIERSLSRSQATGAGSYARFRGVLRIL
EVGDTGTFSSSGSYFMQAMGKHTGGGGSPDPAICLYRAHPVYGDDGNGNQ
VQVSFDIWREQINFRGGSGSAGRTEVFLKNVLKNEQIDIELEVGFRDDPN
NPGQTLHYADAKIGGEEFNWNIPEPERGIESGIRYGAYRVKGGRAQFRWA
NTSYTKDEVN
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain6d3u Chain A Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6d3u Structural and functional characterization of PL28 family ulvan lyase NLR48 fromNonlabens ulvanivorans.
Resolution2.21 Å
Binding residue
(original residue number in PDB)		G59 N61 D79 S81 A84 N85
Binding residue
(residue number reindexed from 1)		G16 N18 D36 S38 A41 N42
Annotation score4
Enzymatic activity
Enzyme Commision number 4.2.2.-
External links
PDB RCSB:6d3u, PDBe:6d3u, PDBj:6d3u
PDBsum6d3u
PubMed29875159
UniProtA0A084JZF2|UL28B_NONUL Ulvan lyase NLR48 (Gene Name=IL45_01530)

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