Structure of PDB 6br9 Chain A Binding Site BS03

Receptor Information

>6br9 Chain A (length=233) Species: 928301 (Fowlpox virus strain NVSL) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

KKDTNEIVQDLKKILGIVSLYKILMENNSFIIRTINKVLADSNYIIKIIA
LFNTDVVSDKIKLEEYKDVFSFSKENVIFGIKCFCDITIDGIKYVSFFKK
VLPNIILFQTSCVKTTQFVNIFSKLSSIVYSEILTNERLHVLFSEIMASF
KTKVSVEDLKKRKVNNIQGLISEISNNREMYKNIFVEEYEKHKTTLISIV
QCITDNYNINYKENAVDIEFIFDFIQEHYISKL

Ligand information

Ligand ID

6OU

InChI

InChI=1S/C39H76NO8P/c1-3-5-7-9-11-13-15-17-18-20-22-24-26-28-30-32-39(42)48-37(36-47-49(43,44)46-34-33-40)35-45-38(41)31-29-27-25-23-21-19-16-14-12-10-8-6-4-2/h17-18,37H,3-16,19-36,40H2,1-2H3,(H,43,44)/b18-17-/t37-/m1/s1

InChIKey

FHQVHHIBKUMWTI-OTMQOFQLSA-N

SMILES

Software	SMILES
CACTVS 3.385	CCCCCCCCCCCCCCCC(=O)OC[C@H](CO[P](O)(=O)OCCN)OC(=O)CCCCCCC\C=C/CCCCCCCC
OpenEye OEToolkits 2.0.6	CCCCCCCCCCCCCCCC(=O)OC[C@H](COP(=O)(O)OCCN)OC(=O)CCCCCCC/C=C\CCCCCCCC
CACTVS 3.385	CCCCCCCCCCCCCCCC(=O)OC[CH](CO[P](O)(=O)OCCN)OC(=O)CCCCCCCC=CCCCCCCCC
OpenEye OEToolkits 2.0.6	CCCCCCCCCCCCCCCC(=O)OCC(COP(=O)(O)OCCN)OC(=O)CCCCCCCC=CCCCCCCCC

Formula

C39 H76 N O8 P

Name

[(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate

PDB chain

6br9 Chain A Residue 403 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	6br9 Structure of a lipid-bound viral membrane assembly protein reveals a modality for enclosing the lipid bilayer.
Resolution	2.2 Å
Binding residue (original residue number in PDB)	I181 F208 N212 F215 Y370
Binding residue (residue number reindexed from 1)	I45 F72 N76 F79 Y229
Annotation score	1

Enzymatic activity

Enzyme Commision number

External links

PDB	RCSB:6br9, PDBe:6br9, PDBj:6br9
PDBsum	6br9
PubMed	29915071
UniProt	Q9J563\|A6_FOWPN Protein A6 homolog (Gene Name=FPV170)

[Back to BioLiP]