Structure of PDB 6bmf Chain A Binding Site BS03

Receptor Information
>6bmf Chain A (length=277) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RGALSSAILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLFKGNRKP
TSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVK
QLFAMARENKPSIIFIDEVDALTGTRGEGESEASRRIKTELLVQMNGVGN
DSQGVLVLGATNIPWQLDSAIRRRFERRIYIPLPDLAARTTMFEINVGDT
PCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSAPDLTIKDF
LKAIKSTRPTVNEDDLLKQEQFTRDFG
Ligand information
Ligand IDBEF
InChIInChI=1S/Be.3FH/h;3*1H/q+2;;;/p-3
InChIKeyOGIAHMCCNXDTIE-UHFFFAOYSA-K
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0[Be-](F)(F)F
ACDLabs 10.04
CACTVS 3.341		F[Be-](F)F
FormulaBe F3
NameBERYLLIUM TRIFLUORIDE ION
ChEMBL
DrugBank
ZINC
PDB chain6bmf Chain A Residue 502 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6bmf The AAA ATPase Vps4 binds ESCRT-III substrates through a repeating array of dipeptide-binding pockets.
Resolution3.2 Å
Binding residue
(original residue number in PDB)		P175 G176 K179
Binding residue
(residue number reindexed from 1)		P60 G61 K64
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0016887 ATP hydrolysis activity

View graph for
Molecular Function
External links
PDB RCSB:6bmf, PDBe:6bmf, PDBj:6bmf
PDBsum6bmf
PubMed29165244
UniProtP52917|VPS4_YEAST Vacuolar protein sorting-associated protein 4 (Gene Name=VPS4)

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