Structure of PDB 6b9v Chain A Binding Site BS03

Receptor Information
>6b9v Chain A (length=254) Species: 204669 (Candidatus Koribacter versatilis Ellin345) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MLMRATLTVLGSGTSMGVPTIGCDCAVCSSSDPHDRRLRPSVMVQYDGKL
VLIDTTPDFREQALREGIKKIDAIVYTHGHADHILGLDDVRPLSFPRITG
GARVPLYANEKTERVLKHVFKYIFQVEMHRVHHEAIELFGAKFIPVPVIH
GETEIYGYRFGSAAYLTDFSSIPDASMEMLRGLDILFLDALRHKPHPTHS
TLDNSVSIAEKLKAKHTYFTHISHDLPHEETNRQLPAGIQLAHDGLKLEF
ELCL
Ligand information
Ligand IDPO4
InChIInChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4)/p-3
InChIKeyNBIIXXVUZAFLBC-UHFFFAOYSA-K
SMILES
SoftwareSMILES
CACTVS 3.341[O-][P]([O-])([O-])=O
ACDLabs 10.04[O-]P([O-])([O-])=O
OpenEye OEToolkits 1.5.0[O-]P(=O)([O-])[O-]
FormulaO4 P
NamePHOSPHATE ION
ChEMBL
DrugBankDB14523
ZINC
PDB chain6b9v Chain A Residue 303 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6b9v An unusual diphosphatase from the PhnP family cleaves reactive FAD photoproducts.
Resolution1.88 Å
Binding residue
(original residue number in PDB)		H80 D82 H83 H160 D178 H209 H231
Binding residue
(residue number reindexed from 1)		H80 D82 H83 H150 D168 H199 H221
Annotation score3
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:6b9v, PDBe:6b9v, PDBj:6b9v
PDBsum6b9v
PubMed29229761
UniProtQ1INB9

[Back to BioLiP]