Structure of PDB 5znp Chain A Binding Site BS03

Receptor Information
>5znp Chain A (length=185) Species: 3694 (Populus trichocarpa) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KAKAPRRTLDSYTVKPINKTVKPGDCVLMRPSDPSKPSYVAKIERIESDG
RGPNVRVRVRWYYRPEESIGGRRQFHGSKEVFLSDHYDTQSADTIEGKCM
VHSFKNYTKLDAVGNDDFFCRFEYNSSTGAFNPDRVAVYCKCEMPYNPDD
LMVQCEGCSDWFHPACIEMSAEEAKRLDHFFCENC
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain5znp Chain A Residue 502 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5znp Dual recognition of H3K4me3 and H3K27me3 by a plant histone reader SHL.
Resolution2.8 Å
Binding residue
(original residue number in PDB)
C160 C184
Binding residue
(residue number reindexed from 1)
C158 C182
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003682 chromatin binding
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:5znp, PDBe:5znp, PDBj:5znp
PDBsum5znp
PubMed29930355
UniProtB9H0V2

[Back to BioLiP]