Structure of PDB 5xkg Chain A Binding Site BS03
Receptor Information
>5xkg Chain A (length=437) Species:
9823
(Sus scrofa) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFN
TFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAA
NNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFT
SLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDC
AFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNV
DLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTG
FKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYA
KRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGV
Ligand information
Ligand ID
890
InChI
InChI=1S/C17H16N2O3/c1-19(11-7-8-16(21-2)13(18)9-11)14-10-17(20)22-15-6-4-3-5-12(14)15/h3-10H,18H2,1-2H3
InChIKey
BSBGOXRTSLNAPO-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 2.0.6
CN(c1ccc(c(c1)N)OC)C2=CC(=O)Oc3c2cccc3
CACTVS 3.385
COc1ccc(cc1N)N(C)C2=CC(=O)Oc3ccccc23
Formula
C17 H16 N2 O3
Name
4-[(3-azanyl-4-methoxy-phenyl)-methyl-amino]chromen-2-one
ChEMBL
CHEMBL4591592
DrugBank
ZINC
PDB chain
5xkg Chain B Residue 504 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5xkg
Identification of a powerful and reversible microtubule-inhibitor with efficacy against multidrug-resistant tumors
Resolution
2.2 Å
Binding residue
(original residue number in PDB)
T179 A180
Binding residue
(residue number reindexed from 1)
T179 A180
Annotation score
1
Enzymatic activity
Enzyme Commision number
3.6.5.-
Gene Ontology
Molecular Function
GO:0003924
GTPase activity
GO:0005200
structural constituent of cytoskeleton
GO:0005525
GTP binding
GO:0016787
hydrolase activity
GO:0046872
metal ion binding
Biological Process
GO:0000226
microtubule cytoskeleton organization
GO:0000278
mitotic cell cycle
GO:0007017
microtubule-based process
Cellular Component
GO:0005737
cytoplasm
GO:0005856
cytoskeleton
GO:0005874
microtubule
GO:0015630
microtubule cytoskeleton
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:5xkg
,
PDBe:5xkg
,
PDBj:5xkg
PDBsum
5xkg
PubMed
UniProt
Q2XVP4
|TBA1B_PIG Tubulin alpha-1B chain (Gene Name=TUBA1B)
[
Back to BioLiP
]