Structure of PDB 5u6m Chain A Binding Site BS03
Receptor Information
>5u6m Chain A (length=442) Species:
3702
(Arabidopsis thaliana) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GHVLAVPYPTQGHITPFRQFCKRLHFKGLKTTLALTTFVFNSINPDLSGP
ISIATISDGYDHGGFETADSIDDYLKDFKTSGSKTIADIIQKHQTSDNPI
TCIVYDAFLPWALDVAREFGLVATPFFTQPCAVNYVYYLSYINNGSLQLP
IEELPFLELQDLPSFFSVSGSYPAYFEMVLQQFINFEKADFVLVNSFQEL
ELHENELWSKACPVLTIGPTIPSIYLDQRIKSDTGYDLNLFESKDDSFCI
NWLDTRPQGSVVYVAFGSMAQLTNVQMEELASAVSNFSFLWVVRSSEEEK
LPSGFLETVNKEKSLVLKWSPQLQVLSNKAIGCFLTHCGWNSTMEALTFG
VPMVAMPQWTDQPMNAKYIQDVWKAGVRVKTEKESGIAKREEIEFSIKEV
MEGERSKEMKKNVKKWRDLAVKSLNEGGSTDTNIDTFVSRVQ
Ligand information
Ligand ID
SAL
InChI
InChI=1S/C7H6O3/c8-6-4-2-1-3-5(6)7(9)10/h1-4,8H,(H,9,10)
InChIKey
YGSDEFSMJLZEOE-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
O=C(O)c1ccccc1O
OpenEye OEToolkits 1.5.0
c1ccc(c(c1)C(=O)O)O
CACTVS 3.341
OC(=O)c1ccccc1O
Formula
C7 H6 O3
Name
2-HYDROXYBENZOIC ACID;
SALICYLIC ACID
ChEMBL
CHEMBL424
DrugBank
DB00936
ZINC
ZINC000000001554
PDB chain
5u6m Chain A Residue 503 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5u6m
Differences in salicylic acid glucose conjugations by UGT74F1 and UGT74F2 from Arabidopsis thaliana.
Resolution
2.568 Å
Binding residue
(original residue number in PDB)
H18 F113 Q134 M183 T365
Binding residue
(residue number reindexed from 1)
H13 F108 Q129 M178 T360
Annotation score
2
Enzymatic activity
Enzyme Commision number
2.4.1.-
Gene Ontology
Molecular Function
GO:0008194
UDP-glycosyltransferase activity
GO:0016757
glycosyltransferase activity
GO:0035251
UDP-glucosyltransferase activity
GO:0052639
salicylic acid glucosyltransferase (ester-forming) activity
GO:0052640
salicylic acid glucosyltransferase (glucoside-forming) activity
GO:0052641
benzoic acid glucosyltransferase activity
GO:0080002
UDP-glucose:4-aminobenzoate acylglucosyltransferase activity
GO:0090704
nicotinate-O-glucosyltransferase activity
Biological Process
GO:0009696
salicylic acid metabolic process
GO:0010030
positive regulation of seed germination
GO:0018874
benzoate metabolic process
GO:0046482
para-aminobenzoic acid metabolic process
Cellular Component
GO:0005829
cytosol
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:5u6m
,
PDBe:5u6m
,
PDBj:5u6m
PDBsum
5u6m
PubMed
28425481
UniProt
O22822
|U74F2_ARATH UDP-glycosyltransferase 74F2 (Gene Name=UGT74F2)
[
Back to BioLiP
]