Structure of PDB 5oy2 Chain A Binding Site BS03
Receptor Information
>5oy2 Chain A (length=327) [
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EPGLPPGPLENSSAKLVNDEAHPWKPLRPGDIRGPCPGLNTLASHGYLPR
NGVATPAQIINAVQEGFNFDNQAAIFATYAAHLVDGNLITDLLSIGRKTR
LTGPDPPPPASVGGLNEHGTFEGDASMTRGDAFFGNNHDFNETLFEQLVD
YSNRFGGGKYNLTVAGELRFKRIQDSIATNPNFSFVDFRFFTAYGETTFP
ANLFVDGRRDDGQLDMDAARSFFQFSRMPDDFFRAPSPRSGTGVEVVVQA
HPMQPGRNVGKINSYTVDPTSSDFSTPCLMYEKFVNITVKSLYPNPTVQL
RKALNTNLDFLFQGVAAGCTQVFPYGR
Ligand information
Ligand ID
3DM
InChI
InChI=1S/C8H10O3/c1-10-6-4-3-5-7(11-2)8(6)9/h3-5,9H,1-2H3
InChIKey
KLIDCXVFHGNTTM-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
COc1cccc(c1O)OC
CACTVS 3.341
COc1cccc(OC)c1O
ACDLabs 10.04
O(c1cccc(OC)c1O)C
Formula
C8 H10 O3
Name
2,6-dimethoxyphenol
ChEMBL
CHEMBL109652
DrugBank
ZINC
ZINC000000154666
PDB chain
5oy2 Chain A Residue 1009 [
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Receptor-Ligand Complex Structure
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PDB
5oy2
Structural Insights into the Substrate Promiscuity of a Laboratory-Evolved Peroxygenase.
Resolution
1.36 Å
Binding residue
(original residue number in PDB)
A77 F121 T192 E196 F199
Binding residue
(residue number reindexed from 1)
A77 F121 T192 E196 F199
Annotation score
1
Enzymatic activity
Enzyme Commision number
1.11.2.1
: unspecific peroxygenase.
Gene Ontology
Molecular Function
GO:0004601
peroxidase activity
GO:0020037
heme binding
GO:0046872
metal ion binding
Biological Process
GO:0042744
hydrogen peroxide catabolic process
GO:0098869
cellular oxidant detoxification
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Molecular Function
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Biological Process
External links
PDB
RCSB:5oy2
,
PDBe:5oy2
,
PDBj:5oy2
PDBsum
5oy2
PubMed
30376293
UniProt
B9W4V6
|APO1_CYCAE Aromatic peroxygenase (Gene Name=APO1)
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