Structure of PDB 5o19 Chain A Binding Site BS03

Receptor Information
>5o19 Chain A (length=176) Species: 11073 (Japanese encephalitis virus strain SA-14) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DECDGAIIGTAVKGHVAVHSDLSYWIESRYNDTWKLERAVFGEVKSCTWP
ETHTLWGDDVEESELIIPHTIAGPKSKHNRREGYKTQNQGPWDENGIVLD
FDYCPGTKVTITEDCSKRGPSVRTTTDSGKLITDWCCRSCSLPPLRFRTE
NGCWYGMEIRPVMHDETTLVRSQVDA
Ligand information
Ligand IDSO4
InChIInChI=1S/H2O4S/c1-5(2,3)4/h(H2,1,2,3,4)/p-2
InChIKeyQAOWNCQODCNURD-UHFFFAOYSA-L
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0[O-]S(=O)(=O)[O-]
CACTVS 3.341[O-][S]([O-])(=O)=O
ACDLabs 10.04[O-]S([O-])(=O)=O
FormulaO4 S
NameSULFATE ION
ChEMBL
DrugBankDB14546
ZINC
PDB chain5o19 Chain A Residue 404 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5o19 Structural Study of the C-Terminal Domain of Nonstructural Protein 1 from Japanese Encephalitis Virus.
Resolution2.1 Å
Binding residue
(original residue number in PDB)		K261 R294
Binding residue
(residue number reindexed from 1)		K85 R118
Annotation score1
Enzymatic activity
Enzyme Commision number 2.1.1.56: mRNA (guanine-N(7))-methyltransferase.
2.1.1.57: methyltransferase cap1.
2.7.7.48: RNA-directed RNA polymerase.
3.4.21.91: flavivirin.
3.6.1.15: nucleoside-triphosphate phosphatase.
3.6.4.13: RNA helicase.
External links
PDB RCSB:5o19, PDBe:5o19, PDBj:5o19
PDBsum5o19
PubMed29343583
UniProtP27395|POLG_JAEV1 Genome polyprotein

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