Structure of PDB 5lta Chain A Binding Site BS03

Receptor Information
>5lta Chain A (length=698) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TTAKQAEAVEDSDINPWTGQRHSERYFKILKARRKLPVNKQRQEFLDLYH
NNQILVFVGETGSGKTTQIPQYVLYDELPHQTGKLIACTQPRRVAAMSVA
QRVADELDVKLGEEVGYSIRFENKTSSKTLLKYMTDGQLLREAMHDRDMS
RYSCIILDEAHERTLATDILMALLKQLSERRKDLKIIVMSATLDAQKFQS
YFFNAPLLAVPGRTHPVEIFYTPEAERDYVEAAIRTVLQIHACEPEGDIL
LFLTGEEEIEDACRRISLEVDEMIRESDAGPMSVYPLYGTLPPHQQQRIF
EKAPQPFRPGGRPGRKCIVATNIAETSLTIDGIVYVVDPGFSKQKIYNPR
TRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFKKELIEQTYP
EILRSNLSNTVLELKKLGVEDLVHFDLMDPPAPETMMRALEELNYLACLD
DDGELTPLGNLASEFPLDPALAVMLISSPEFYCSNEILSITSLLSVPQIW
VRPANARKRADEMKAQFAHPDGDHLTLLNAYHAYKGAEARGEDMKKWCHE
HFLSYRHLSSADNVRAQLKKIMETHGIELVSTPFHDKNYYTNIRRALLAG
FFMQVAMRESSNSKVYKTVKDEQLVLIHPSTTVTTPYEWVVYNEFVLTTK
QYVRTVTNIRPEWLLEIAPVYYDLSTFQKGEIKNALTRVAEKIRRQQA
Ligand information
Ligand IDBEF
InChIInChI=1S/Be.3FH/h;3*1H/q+2;;;/p-3
InChIKeyOGIAHMCCNXDTIE-UHFFFAOYSA-K
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0[Be-](F)(F)F
ACDLabs 10.04
CACTVS 3.341		F[Be-](F)F
FormulaBe F3
NameBERYLLIUM TRIFLUORIDE ION
ChEMBL
DrugBank
ZINC
PDB chain5lta Chain A Residue 803 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5lta Structural insights into the mechanism of the DEAH-box RNA helicase Prp43.
Resolution2.621 Å
Binding residue
(original residue number in PDB)		T121 K125 R432 R435
Binding residue
(residue number reindexed from 1)		T61 K65 R372 R375
Annotation score1
Enzymatic activity
Enzyme Commision number 3.6.4.13: RNA helicase.
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0003724 RNA helicase activity
GO:0004386 helicase activity
GO:0005524 ATP binding
GO:0016787 hydrolase activity
GO:0046872 metal ion binding
Cellular Component
GO:0005681 spliceosomal complex
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:5lta, PDBe:5lta, PDBj:5lta
PDBsum5lta
PubMed28092261
UniProtG0RY84

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