Structure of PDB 5lcm Chain A Binding Site BS03
Receptor Information
>5lcm Chain A (length=115) Species:
559292
(Saccharomyces cerevisiae S288C) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
APKCIECHINIEMDPVLHDVFKLQVCKQCSKEHPEKYALLTKTECKEDYF
LTDPELNDEDLFHRLEKPNPHSGTFARMQLFVRCEVEAFAFKKWGGEEGL
DEEWQRREEGKAHRR
Ligand information
Ligand ID
ZN
InChI
InChI=1S/Zn/q+2
InChIKey
PTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
Formula
Zn
Name
ZINC ION
ChEMBL
CHEMBL1236970
DrugBank
DB14532
ZINC
PDB chain
5lcm Chain A Residue 401 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5lcm
Structural Insights into the Recognition of N(2) -Aryl- and C8-Aryl DNA Lesions by the Repair Protein XPA/Rad14.
Resolution
1.9 Å
Binding residue
(original residue number in PDB)
C191 C194 C213 C216
Binding residue
(residue number reindexed from 1)
C4 C7 C26 C29
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003684
damaged DNA binding
Biological Process
GO:0006289
nucleotide-excision repair
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:5lcm
,
PDBe:5lcm
,
PDBj:5lcm
PDBsum
5lcm
PubMed
28444956
UniProt
P28519
|RAD14_YEAST DNA repair protein RAD14 (Gene Name=RAD14)
[
Back to BioLiP
]