Structure of PDB 5j16 Chain A Binding Site BS03

Receptor Information
>5j16 Chain A (length=258) Species: 282459 (Staphylococcus aureus subsp. aureus MSSA476) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MALYGFAQGLIQEAGIRIKQLMEQNTNVDKATEDFIFDTILETYPNHQVL
GEEGHGHDIDTSKGTVWVVDPIDGTLNFVHQQENFAISIGIYIDGKPYAG
FVYDVMADVLYHAKVGEGAYRGSQPLKPLNDSNLRQSIIGINPNWLTKPI
LGEIFKEIVNDSRSARAYGSAALEIVSVATGNLEAYMTPRLQPWDFAGGL
VILYEVNGQASNLLGEPLTISGPNSILVGNRGLHQEISNDYLEPHHDALI
QLHEQRFK
Ligand information
Ligand IDIPD
InChIInChI=1S/C6H13O9P/c7-1-2(8)4(10)6(5(11)3(1)9)15-16(12,13)14/h1-11H,(H2,12,13,14)/p-2/t1-,2-,3+,4-,5-,6-/m1/s1
InChIKeyINAPMGSXUVUWAF-UOTPTPDRSA-L
SMILES
SoftwareSMILES
ACDLabs 12.01O=P([O-])([O-])OC1C(O)C(O)C(O)C(O)C1O
CACTVS 3.370O[C@@H]1[C@@H](O)[C@@H](O)[C@@H](O[P]([O-])([O-])=O)[C@H](O)[C@H]1O
OpenEye OEToolkits 1.7.6[C@H]1([C@H](C([C@@H]([C@@H](C1O)O)O)OP(=O)([O-])[O-])O)O
OpenEye OEToolkits 1.7.6C1(C(C(C(C(C1O)O)OP(=O)([O-])[O-])O)O)O
CACTVS 3.370O[CH]1[CH](O)[CH](O)[CH](O[P]([O-])([O-])=O)[CH](O)[CH]1O
FormulaC6 H11 O9 P
NameD-MYO-INOSITOL-1-PHOSPHATE
ChEMBL
DrugBank
ZINC
PDB chain5j16 Chain A Residue 303 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5j16 Crystal structure of Inositol monophosphate bound SaIMPase-II
Resolution2.4 Å
Binding residue
(original residue number in PDB)
D86 G87 T88 G182 S183 A184
Binding residue
(residue number reindexed from 1)
D73 G74 T75 G169 S170 A171
Annotation score5
Enzymatic activity
Catalytic site (original residue number in PDB) D42 E65 D83 I85 D86 T88 D208
Catalytic site (residue number reindexed from 1) D29 E52 D70 I72 D73 T75 D195
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0008934 inositol monophosphate 1-phosphatase activity
GO:0046872 metal ion binding
Biological Process
GO:0006020 inositol metabolic process
GO:0007165 signal transduction

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:5j16, PDBe:5j16, PDBj:5j16
PDBsum5j16
PubMed
UniProtA0A1I9GET0

[Back to BioLiP]