Structure of PDB 5i0r Chain A Binding Site BS03
Receptor Information
>5i0r Chain A (length=186) Species:
10116
(Rattus norvegicus) [
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ELLKPRTLADLIRILHELFAGDEVNVEEVQAVLEAYESNPAEWALYAKFD
QYRYTRNLVDQGNGKFNLMILCWGEGHGSSIHDHTDSHAFLKLLQGNLKE
TLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHTEPAVSL
HLYSPPFDTCHAFDQRTGHKNKVTMTFHSKFGIRTP
Ligand information
Ligand ID
CL
InChI
InChI=1S/ClH/h1H/p-1
InChIKey
VEXZGXHMUGYJMC-UHFFFAOYSA-M
SMILES
Software
SMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0
[Cl-]
Formula
Cl
Name
CHLORIDE ION
ChEMBL
DrugBank
DB14547
ZINC
PDB chain
5i0r Chain A Residue 503 [
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Receptor-Ligand Complex Structure
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PDB
5i0r
Structure-Based Insights into the Role of the Cys-Tyr Crosslink and Inhibitor Recognition by Mammalian Cysteine Dioxygenase.
Resolution
1.35 Å
Binding residue
(original residue number in PDB)
H140 H155
Binding residue
(residue number reindexed from 1)
H136 H151
Annotation score
1
Enzymatic activity
Enzyme Commision number
1.13.11.20
: cysteine dioxygenase.
Gene Ontology
Molecular Function
GO:0005506
iron ion binding
GO:0008198
ferrous iron binding
GO:0008270
zinc ion binding
GO:0016151
nickel cation binding
GO:0016702
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0017172
cysteine dioxygenase activity
GO:0046872
metal ion binding
GO:0051213
dioxygenase activity
Biological Process
GO:0006534
cysteine metabolic process
GO:0007595
lactation
GO:0019448
L-cysteine catabolic process
GO:0033762
response to glucagon
GO:0042412
taurine biosynthetic process
GO:0043200
response to amino acid
GO:0045471
response to ethanol
GO:0046439
L-cysteine metabolic process
GO:0051384
response to glucocorticoid
GO:0051591
response to cAMP
Cellular Component
GO:0005829
cytosol
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Molecular Function
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Cellular Component
External links
PDB
RCSB:5i0r
,
PDBe:5i0r
,
PDBj:5i0r
PDBsum
5i0r
PubMed
27477048
UniProt
P21816
|CDO1_RAT Cysteine dioxygenase type 1 (Gene Name=Cdo1)
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