Structure of PDB 5hr5 Chain A Binding Site BS03
Receptor Information
>5hr5 Chain A (length=424) Species:
9913
(Bos taurus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
KCSWASYMTNSPTLIVMIGLPARGKTYVSKKLTRYLNWIGVPTKVFNLGV
YRRQAVKSYKSYDFFRHDNEEAMKIRKQCALVALKDVKAYLTEESGQIAV
FDATNTTRERRDLILNFAEENSFKVFFVESVCDDPDVIAANILEVKVSSP
DYPERNRENVMDDFLKRIECYKVTYQPLDPDSHDKDLSFIKVINVGQRFL
VNKVQDYIQSKIVYYLMNIHVHPRTIYLCRHGESEFNLLGKIGGDSGLSV
RGKQFAQALRKFLEEQEIADLKVWTSQLKRTIQTAESLGVTYEQWKILNE
IDAGVCEEMTYAEIQEQYPDEFALRDEEKYLYRYPGGESYQDLVQRLEPV
IMELERQGNVLVISHQAVMRCLLAYFLDKGADELPYLRCPLHTIFKLTPV
AYGCKVETIKLNVEAVNTHRDKPT
Ligand information
Ligand ID
ADP
InChI
InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
XTWYTFMLZFPYCI-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N
Formula
C10 H15 N5 O10 P2
Name
ADENOSINE-5'-DIPHOSPHATE
ChEMBL
CHEMBL14830
DrugBank
DB16833
ZINC
ZINC000012360703
PDB chain
5hr5 Chain A Residue 604 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5hr5
Crystal structure of heart 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase (PFKFB2) and the inhibitory influence of citrate on substrate binding.
Resolution
1.82 Å
Binding residue
(original residue number in PDB)
A49 R50 G51 K52 T53 Y54 S157 N168 E171 V172 K173 Y429
Binding residue
(residue number reindexed from 1)
A22 R23 G24 K25 T26 Y27 S130 N141 E144 V145 K146 Y402
Annotation score
5
Enzymatic activity
Catalytic site (original residue number in PDB)
R257 H258 N264 R307 E327 H392
Catalytic site (residue number reindexed from 1)
R230 H231 N237 R280 E300 H365
Enzyme Commision number
2.7.1.105
: 6-phosphofructo-2-kinase.
3.1.3.46
: fructose-2,6-bisphosphate 2-phosphatase.
Gene Ontology
Molecular Function
GO:0003824
catalytic activity
GO:0003873
6-phosphofructo-2-kinase activity
GO:0004331
fructose-2,6-bisphosphate 2-phosphatase activity
GO:0005524
ATP binding
GO:0016301
kinase activity
GO:0016787
hydrolase activity
Biological Process
GO:0006000
fructose metabolic process
GO:0006003
fructose 2,6-bisphosphate metabolic process
GO:0006096
glycolytic process
GO:0016310
phosphorylation
GO:0046835
carbohydrate phosphorylation
Cellular Component
GO:0005829
cytosol
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:5hr5
,
PDBe:5hr5
,
PDBj:5hr5
PDBsum
5hr5
PubMed
27802586
UniProt
P26285
|F262_BOVIN 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 (Gene Name=PFKFB2)
[
Back to BioLiP
]