Structure of PDB 5fsc Chain A Binding Site BS03

Receptor Information
>5fsc Chain A (length=226) Species: 486041 (Laccaria bicolor S238N-H82) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PWKGISGSLSRISAGSVTNVWGVNAANNIYRYTGDDAKPWVQIPGALTDI
GAAADGTVWGVNAAGNIYRYVWDSNHWTQIKGALKRISAGSRTNVWGVNA
GGAIYRYTGDDANPWVQIPGVLSDIGAGADGTVWGVNAAGEIYRYTGDQG
DPNHWVKIPGALSAISAGIKTNVWGVNSANNIYTSTGDDKNPWLGIGGSL
VDIGAGTDGVVWGVNAGGGIYRWIRD
Ligand information
Ligand IDG8Z
InChIInChI=1S/C10H18O6/c1-3-4-15-10-8(13)7(12)9(14-2)6(5-11)16-10/h3,6-13H,1,4-5H2,2H3/t6-,7-,8+,9-,10+/m1/s1
InChIKeyVOIKDSWIMJSKCR-SPFKKGSWSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.6COC1C(OC(C(C1O)O)OCC=C)CO
OpenEye OEToolkits 1.7.6CO[C@@H]1[C@H](O[C@@H]([C@H]([C@H]1O)O)OCC=C)CO
CACTVS 3.385CO[C@H]1[C@H](O)[C@H](O)[C@@H](OCC=C)O[C@@H]1CO
CACTVS 3.385CO[CH]1[CH](O)[CH](O)[CH](OCC=C)O[CH]1CO
FormulaC10 H18 O6
Nameprop-2-en-1-yl 4-O-methyl-alpha-D-mannopyranoside;
Allyl-Alpha-4-Methyl-Mannoside;
prop-2-en-1-yl 4-O-methyl-alpha-D-mannoside;
prop-2-en-1-yl 4-O-methyl-D-mannoside;
prop-2-en-1-yl 4-O-methyl-mannoside
ChEMBLCHEMBL3798866
DrugBank
ZINCZINC000653851576
PDB chain5fsc Chain A Residue 304 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5fsc Crystal Structures of Fungal Tectonin in Complex with O-Methylated Glycans Suggest Key Role in Innate Immune Defense.
Resolution1.95 Å
Binding residue
(original residue number in PDB)
G161 A162 N178 Y184
Binding residue
(residue number reindexed from 1)
G160 A161 N177 Y183
Annotation score1
Binding affinityPDBbind-CN: -logKd/Ki=2.36,Kd=4.4mM
Enzymatic activity
Enzyme Commision number ?
External links