Structure of PDB 5c8e Chain A Binding Site BS03

Receptor Information
>5c8e Chain A (length=273) Species: 262724 (Thermus thermophilus HB27) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GVYTIAEVEAMTGLSAEVLRQWERRYGFPKPRRTPGGHRLYSAEDVEALK
TIKRWLEEGATPKAAIRRYLAQEVRPEDLGTGLLEALLRGDLAGAEALFR
RGLRFWGPEGVLEHLLLPVLREVGEAWHRGEIGVAEEHLASTFLRARLQE
LLDLAGFPPGPPVLVTTPPGERHEIGAMLAAYHLRRKGVPALYLGPDTPL
PDLRALARRLGAGAVVLSAVLSEPLRALPDGALKDLAPRVFLGGQGAGPE
EARRLGAEYMEDLKGLAEALWLP
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5c8e Structural basis for gene regulation by a B12-dependent photoreceptor.
Resolution3.89 Å
Binding residue
(original residue number in PDB)		R29 Y30 P66
Binding residue
(residue number reindexed from 1)		R25 Y26 P62
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003700 DNA-binding transcription factor activity
GO:0031419 cobalamin binding
GO:0042802 identical protein binding
GO:0046872 metal ion binding
Biological Process
GO:0006355 regulation of DNA-templated transcription

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5c8e, PDBe:5c8e, PDBj:5c8e
PDBsum5c8e
PubMed26416754
UniProtQ746J7

[Back to BioLiP]