Structure of PDB 5awp Chain A Binding Site BS03

Receptor Information
>5awp Chain A (length=596) Species: 1665 (Arthrobacter globiformis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PVTAAPPLRLASRNSVFTRSGAGPRYWNIYGYSFPHNAPIPENEWKVNID
WLAGNFADFGYDIACTDGWIEGSSRTTGNGYITSYNDSWQHDWAYWANYL
AARKMKLGVYYNPLWVHRAAVEDASKTVLGRPDVKIADLVVPGDFFARDI
GGNQLYWLDVTKSGAKEYVQGYVRYFKDLGVPYLRIDFLSWYEDGRDANI
GQVNAPHGRANYELALSWINEAAGEDMEVSLVMPHMFQDGSAELANGDLV
RINADADKGGWDRLSGMRQNWQDAWPNWANPFCGFTGWSHRNGRGQLILD
GDFMRASTFASDEERKTMMNLMVAAGSPLAIADTYQQIGNNAWVYTNKEV
LQLNADGLVGKPLYRSATPFSKDPGSRDTERWAGQLPDGSWGVALFNRSD
TETVTKTIDFAKDLGLATGGNVRDLWEHRNLGMDSRATAALAPHASAIFR
VTPPKMHGTTRYPAAFAAWGGGAGFNYNHPGYDGNGFVDGLQAGSGSADP
LVTFAVQVPHRGSYAIRYRYANATGDTSTMTVTAEKADRSTVDGPVHVSF
PGLATWDTWGVADGTITLDAGLNLVTIGRGATDKGAINLNWIELDM
Ligand information
Ligand IDGLC
InChIInChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5-,6+/m1/s1
InChIKeyWQZGKKKJIJFFOK-DVKNGEFBSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C(C1C(C(C(C(O1)O)O)O)O)O
OpenEye OEToolkits 1.5.0C([C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)O)O)O)O)O
CACTVS 3.341OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
CACTVS 3.341OC[C@H]1O[C@H](O)[C@H](O)[C@@H](O)[C@@H]1O
ACDLabs 10.04OC1C(O)C(OC(O)C1O)CO
FormulaC6 H12 O6
Namealpha-D-glucopyranose;
alpha-D-glucose;
D-glucose;
glucose
ChEMBLCHEMBL423707
DrugBank
ZINCZINC000003861213
PDB chain5awp Chain C Residue 2 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5awp Crystal Structure and Mutational Analysis of Isomalto-dextranase, a Member of Glycoside Hydrolase Family 27
Resolution2.0 Å
Binding residue
(original residue number in PDB)		H489 Q502 W566 A596 N598
Binding residue
(residue number reindexed from 1)		H479 Q492 W556 A586 N588
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016798 hydrolase activity, acting on glycosyl bonds
GO:0030246 carbohydrate binding
Biological Process
GO:0005975 carbohydrate metabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5awp, PDBe:5awp, PDBj:5awp
PDBsum5awp
PubMed26330557
UniProtQ7WSN5

[Back to BioLiP]