Structure of PDB 4y1t Chain A Binding Site BS03

Receptor Information
>4y1t Chain A (length=126) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QRGLAHLVVSNFRAEHLAGDATTATDAYLKVFFGGQEFRTGVVWNNNNPR
WTDKMDFENVLLSTGGPLRVQVWDADAGADDDLLGSCDRSPHSGFHEVTC
ELNHGRVKFSYHAKCLPHLTGGTCLE
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain4y1t Chain A Residue 603 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB4y1t Structural Basis for Ca2+-mediated Interaction of the Perforin C2 Domain with Lipid Membranes.
Resolution2.666 Å
Binding residue
(original residue number in PDB)		D429 T432 A433 D435 N454
Binding residue
(residue number reindexed from 1)		D20 T23 A24 D26 N45
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:4y1t, PDBe:4y1t, PDBj:4y1t
PDBsum4y1t
PubMed26306037
UniProtP10820|PERF_MOUSE Perforin-1 (Gene Name=Prf1)

[Back to BioLiP]