Structure of PDB 4h55 Chain A Binding Site BS03

Receptor Information
>4h55 Chain A (length=233) Species: 61861 (Canavalia brasiliensis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ADTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTA
HIIYNSVGKRLSAVVSYPNGDSATVSYDVDLDNVLPEWVRVGLSASTGLY
KETNTILSWSFTSKLKSNTNALHFMFNQFSKDQKDLILQGDATTGTEGNL
RLTRVSSNGSPQGSSVGRALFYAPVHIWESSAVVASFEATFTFLIKSPDS
HPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN
Ligand information
Ligand IDBDR
InChIInChI=1S/C5H10O5/c6-1-2-3(7)4(8)5(9)10-2/h2-9H,1H2/t2-,3-,4-,5-/m1/s1
InChIKeyHMFHBZSHGGEWLO-TXICZTDVSA-N
SMILES
SoftwareSMILES
CACTVS 3.341OC[C@H]1O[C@@H](O)[C@H](O)[C@@H]1O
OpenEye OEToolkits 1.5.0C(C1C(C(C(O1)O)O)O)O
CACTVS 3.341OC[CH]1O[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 1.5.0C([C@@H]1[C@H]([C@H]([C@@H](O1)O)O)O)O
ACDLabs 10.04OC1C(OC(O)C1O)CO
FormulaC5 H10 O5
Namebeta-D-ribofuranose;
beta-D-ribose;
D-ribose;
ribose;
BETA-D-RIBOFURANOSYL
ChEMBL
DrugBank
ZINCZINC000003860713
PDB chain4h55 Chain A Residue 303 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB4h55 Crystal structure of Canavalia brasiliensis seed lectin (ConBr) in complex with beta-d-ribofuranose
Resolution2.15 Å
Binding residue
(original residue number in PDB)		Y12 G98 L99 Y100 A207 D208
Binding residue
(residue number reindexed from 1)		Y12 G98 L99 Y100 A203 D204
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005537 D-mannose binding
GO:0030246 carbohydrate binding
GO:0046872 metal ion binding
GO:0090729 toxin activity
Biological Process
GO:0035821 modulation of process of another organism

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Molecular Function
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Biological Process
External links
PDB RCSB:4h55, PDBe:4h55, PDBj:4h55
PDBsum4h55
PubMed
UniProtP55915|CONA_CANBR Concanavalin-Br

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