Structure of PDB 4efh Chain A Binding Site BS03
Receptor Information
>4efh Chain A (length=364) Species:
5755
(Acanthamoeba castellanii) [
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VQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL
NPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVT
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR
DIKEKLCYVALDFEQEMHTAASSSALEKSYELPDGQVITIGNERFRAPEA
LFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIA
DRMQKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE
EYDESGPSIVHRKC
Ligand information
Ligand ID
ADP
InChI
InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
XTWYTFMLZFPYCI-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N
Formula
C10 H15 N5 O10 P2
Name
ADENOSINE-5'-DIPHOSPHATE
ChEMBL
CHEMBL14830
DrugBank
DB16833
ZINC
ZINC000012360703
PDB chain
4efh Chain A Residue 403 [
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Receptor-Ligand Complex Structure
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PDB
4efh
Multiple Forms of Spire-Actin Complexes and their Functional Consequences.
Resolution
2.48 Å
Binding residue
(original residue number in PDB)
G13 S14 G15 K18 G156 D157 G182 R210 K213 E214 G302 T303 M305 F306 K336
Binding residue
(residue number reindexed from 1)
G9 S10 G11 K14 G146 D147 G172 R200 K203 E204 G292 T293 M295 F296 K326
Annotation score
5
Enzymatic activity
Enzyme Commision number
3.6.4.-
Gene Ontology
Molecular Function
GO:0005524
ATP binding
GO:0016787
hydrolase activity
Biological Process
GO:0006909
phagocytosis
Cellular Component
GO:0005737
cytoplasm
GO:0005856
cytoskeleton
GO:0015629
actin cytoskeleton
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:4efh
,
PDBe:4efh
,
PDBj:4efh
PDBsum
4efh
PubMed
22334675
UniProt
P02578
|ACT1_ACACA Actin-1
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