Structure of PDB 4d8j Chain A Binding Site BS03
Receptor Information
>4d8j Chain A (length=149) Species:
562
(Escherichia coli) [
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MKYQQLENLESGWKWKYLVKKHREGELITRYIEASAAQEAVDVLLSLENE
PVLVNGWIDKHMNPELVNRMKQTIRARRKRHFNAEHQHTRKKSIDLEFIV
WQRLAGLAQRRGKTLSETIVQLIEDAENKEKYANKMSSLKQDLQALLGK
Ligand information
>4d8j Chain I (length=19) [
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ttcgtgacaatgtcacgaa
Receptor-Ligand Complex Structure
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PDB
4d8j
Molecular basis for a protein-mediated DNA-bridging mechanism that functions in condensation of the E. coli chromosome.
Resolution
3.55 Å
Binding residue
(original residue number in PDB)
R103 R110
Binding residue
(residue number reindexed from 1)
R103 R110
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0005515
protein binding
GO:0005543
phospholipid binding
GO:0042803
protein homodimerization activity
GO:0043565
sequence-specific DNA binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
GO:0007059
chromosome segregation
GO:0051276
chromosome organization
GO:0051289
protein homotetramerization
GO:0051301
cell division
Cellular Component
GO:0005737
cytoplasm
GO:0097047
DNA replication termination region
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:4d8j
,
PDBe:4d8j
,
PDBj:4d8j
PDBsum
4d8j
PubMed
23084832
UniProt
P0A8N0
|MATP_ECOLI Macrodomain Ter protein (Gene Name=matP)
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