Structure of PDB 4c9f Chain A Binding Site BS03

Receptor Information
>4c9f Chain A (length=132) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LCRLCPWDWTFLLGNCYFFSKSQRNWNDAVTACKEVKAQLVIINSDEEQT
FLQQTSKAKGPTWMGLSDLKKEATWLWVDGSTLSSRFQKYWNRGEPNNIG
EEDCVEFAGDGWNDSKCELKKFWICKKSATPC
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain4c9f Chain A Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB4c9f Structural Basis for Selective Recognition of Endogenous and Microbial Polysaccharides by Macrophage Receptor Sign-R1
Resolution2.6 Å
Binding residue
(original residue number in PDB)
E285 N287 E292 D304
Binding residue
(residue number reindexed from 1)
E95 N97 E102 D114
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:4c9f, PDBe:4c9f, PDBj:4c9f
PDBsum4c9f
PubMed25450767
UniProtQ8CJ91|C209B_MOUSE CD209 antigen-like protein B (Gene Name=Cd209b)

[Back to BioLiP]