Structure of PDB 3w2w Chain A Binding Site BS03
Receptor Information
>3w2w Chain A (length=618) Species:
186497
(Pyrococcus furiosus DSM 3638) [
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VKDPTLLRIKIVPVQPFIANSRKQLDLWASSHLLSMLMYKALEVIVDKFG
PEHVIYPSLRDQPFFLKFYLGENIGDEILVANLPNKALAIVSGKEAEKIE
EEIKKRIRDFLLQLYREAVDWAVENGVVKVDRSEKDSMLKEAYLKIVREY
FTVSITWVSLSEKEDIYQVTENAGLSDEDVKKWLKFAEKKENSRVLERIA
IYPLLVKILDSLGERKVTEERFEKSEQLKGWKCHVCGENLAIFGDMYDHD
NLKSLWLDEEPLCPMCLIKRYYPVWIRSKTGQKIRFESVVDVALLYKNWR
KIFDEKYGKDLVSKAREVSEDFVKDNMLVDSDLYYSSTWESGDEEKVKEV
VDFLNAAYKEIGNPPKYYAILVMDGDDMGKVISGEVLYSTPQVHVAISQA
LANFSIREVRSVVKDEGLLIYAGGDDVLAILPVDKALEVAYKIRKEFGKS
FELLPGWKLSAGILIVHYKHPLYDALEKARDLLNNKAKNVPGKDTLAIGL
LKRSGSYYISLVGWELIRVFYNSELRKKLLEEGVGKRFIYHVLREVDTWP
KVGIDEMLKFEVIRHIRGRNKEETKELREKIYGEIKDLLEHVRGNNEVEK
VRGLFTFLKIITDAEVFP
Ligand information
Ligand ID
ATP
InChI
InChI=1S/C10H16N5O13P3/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(26-10)1-25-30(21,22)28-31(23,24)27-29(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H,23,24)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
ZKHQWZAMYRWXGA-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@@](=O)(O)O[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@](O)(=O)O[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
Formula
C10 H16 N5 O13 P3
Name
ADENOSINE-5'-TRIPHOSPHATE
ChEMBL
CHEMBL14249
DrugBank
DB00171
ZINC
ZINC000004261765
PDB chain
3w2w Chain A Residue 903 [
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Receptor-Ligand Complex Structure
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PDB
3w2w
Crystal Structure of the Cmr2-Cmr3 Subcomplex in the CRISPR-Cas RNA Silencing Effector Complex.
Resolution
2.5 Å
Binding residue
(original residue number in PDB)
Y271 K301 D600 G601 D603 M604 G605 I608 H642 K739 K744
Binding residue
(residue number reindexed from 1)
Y56 K86 D374 G375 D377 M378 G379 I382 H394 K488 K493
Annotation score
4
Enzymatic activity
Catalytic site (original residue number in PDB)
F264 I270
Catalytic site (residue number reindexed from 1)
F49 I55
Enzyme Commision number
?
External links
PDB
RCSB:3w2w
,
PDBe:3w2w
,
PDBj:3w2w
PDBsum
3w2w
PubMed
23583914
UniProt
Q8U1S6
|CMR2_PYRFU CRISPR system Cmr subunit Cmr2 (Gene Name=cmr2)
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