Structure of PDB 3pey Chain A Binding Site BS03

Receptor Information
>3pey Chain A (length=391) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AKSFDELGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQS
GTGKTAAFSLTMLTRVNPEDASPQAICLAPSRELARQTLEVVQEMGKFTK
ITSQLIVPDSFEKNKQINAQVIVGTPGTVLDLMRRKLMQLQKIKIFVLDE
ADNMLDQQGLGDQCIRVKRFLPKDTQLVLFSATFADAVRQYAKKIVPNAN
TLELQTNEVNVDAIKQLYMDCKNEADKFDVLTELYGLMTIGSSIIFVATK
KTANVLYGKLKSEGHEVSILHGDLQTQERDRLIDDFREGRSKVLITTNVL
ARGIDIPTVSMVVNYDLPTLANGQADPATYIHRIGRTGRFGRKGVAISFV
HDKNSFNILSAIQKYFGDIEMTRVPTDDWDEVEKIVKKVLK
Ligand information
Ligand IDBEF
InChIInChI=1S/Be.3FH/h;3*1H/q+2;;;/p-3
InChIKeyOGIAHMCCNXDTIE-UHFFFAOYSA-K
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0[Be-](F)(F)F
ACDLabs 10.04
CACTVS 3.341		F[Be-](F)F
FormulaBe F3
NameBERYLLIUM TRIFLUORIDE ION
ChEMBL
DrugBank
ZINC
PDB chain3pey Chain A Residue 1002 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB3pey A conserved mechanism of DEAD-box ATPase activation by nucleoporins and InsP(6) in mRNA export.
Resolution1.401 Å
Binding residue
(original residue number in PDB)		S140 K144 R426 R429
Binding residue
(residue number reindexed from 1)		S50 K54 R336 R339
Annotation score1
Enzymatic activity
Enzyme Commision number 3.6.4.13: RNA helicase.
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003724 RNA helicase activity
GO:0005524 ATP binding

View graph for
Molecular Function
External links
PDB RCSB:3pey, PDBe:3pey, PDBj:3pey
PDBsum3pey
PubMed21441902
UniProtP20449|DBP5_YEAST ATP-dependent RNA helicase DBP5 (Gene Name=DBP5)

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