Structure of PDB 3ol8 Chain A Binding Site BS03
Receptor Information
>3ol8 Chain A (length=461) Species:
12080
(Poliovirus 1) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GEIQWMRPSKEVGYPIINAPSKTKLEPSAFHYVFEGVKEPAVLTKNDPRL
KTDFEEAIFSKYVGNKITEVDEYMKEAVDHYAGQLMSLDINTEQMCLEDA
MYGTDGLEALDLSTSAGYPYVAMGKKKRDILNKQTRDTKEMQKLLDTYGI
NLPLVTYVKDELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHK
NPGVITGSAVGCDPDLFWSKIPVLMEEKLFAFDYTGYDASLSPAWFEALK
MVLEKIGFGDRVDYIDYLNHSHHLYKNKTYCVKGGMPSGCSGTSIFNSMI
NNLIIRTLLLKTYKGIDLDHLKMIAYGDDVIASYPHEVDASLLAQSGKDY
GLTMTPADKSATFETVTWENVTFLKRFFRADEKYPFLIHPVMPMKEIHES
IRWTKDPRNTQDHVRSLCLLAWHNGEEEYNKFLAKIRSVPIGRALDLPEY
STLYRRWLDSF
Ligand information
>3ol8 Chain D (length=3) [
Search RNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
gga
...
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3ol8
Structural basis for active site closure by the poliovirus RNA-dependent RNA polymerase.
Resolution
2.75 Å
Binding residue
(original residue number in PDB)
N18 G124
Binding residue
(residue number reindexed from 1)
N18 G124
Enzymatic activity
Enzyme Commision number
2.7.7.48
: RNA-directed RNA polymerase.
3.4.22.28
: picornain 3C.
3.4.22.29
: picornain 2A.
3.6.1.15
: nucleoside-triphosphate phosphatase.
Gene Ontology
Molecular Function
GO:0003723
RNA binding
GO:0003968
RNA-dependent RNA polymerase activity
Biological Process
GO:0006351
DNA-templated transcription
GO:0039694
viral RNA genome replication
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:3ol8
,
PDBe:3ol8
,
PDBj:3ol8
PDBsum
3ol8
PubMed
21148772
UniProt
B3VQP5
[
Back to BioLiP
]