Structure of PDB 3hhy Chain A Binding Site BS03
Receptor Information
>3hhy Chain A (length=256) Species:
37919
(Rhodococcus opacus) [
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ATADTSPERLAAIAKDALGALNDVILKHGVTYPEYRVFKQWLIDVGEGGE
WPLFLDVFIEHSVEEVLARSRKGTMGSIEGPYYIENSPELPSKCTLPMRE
EDEKITPLVFSGQVTDLDGNGLAGAKVELWHADNDGYYSQFAPHLPEWNL
RGTIIADEEGRYEITTIQPAPYQIPTDGPTGQFIEAQNGHPWRPAHLHLI
VSAPGKESVTTQLYFKGGEWIDSDVASATKPELILDPKTGDDGKNYVTYN
FVLDPA
Ligand information
Ligand ID
CAQ
InChI
InChI=1S/C6H6O2/c7-5-3-1-2-4-6(5)8/h1-4,7-8H
InChIKey
YCIMNLLNPGFGHC-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1ccc(c(c1)O)O
ACDLabs 10.04
CACTVS 3.341
Oc1ccccc1O
Formula
C6 H6 O2
Name
CATECHOL;
1,2-DIHYDROXYBENZENE
ChEMBL
CHEMBL280998
DrugBank
DB02232
ZINC
ZINC000013512214
PDB chain
3hhy Chain A Residue 284 [
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Receptor-Ligand Complex Structure
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PDB
3hhy
Catechol 1,2-dioxygenase from the Gram-positive Rhodococcus opacus 1CP: Quantitative structure/activity relationship and the crystal structures of native enzyme and catechols adducts.
Resolution
1.55 Å
Binding residue
(original residue number in PDB)
V81 P105 Y106 Y162 Y196 R217 H220 H222
Binding residue
(residue number reindexed from 1)
V57 P81 Y82 Y138 Y172 R193 H196 H198
Annotation score
5
Binding affinity
MOAD
: Ki=3uM
Enzymatic activity
Catalytic site (original residue number in PDB)
Y162 Y196 R217 H220 H222
Catalytic site (residue number reindexed from 1)
Y138 Y172 R193 H196 H198
Enzyme Commision number
1.13.11.1
: catechol 1,2-dioxygenase.
Gene Ontology
Molecular Function
GO:0003824
catalytic activity
GO:0005506
iron ion binding
GO:0008199
ferric iron binding
GO:0016702
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0018576
catechol 1,2-dioxygenase activity
GO:0046872
metal ion binding
GO:0051213
dioxygenase activity
Biological Process
GO:0009056
catabolic process
GO:0009712
catechol-containing compound metabolic process
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:3hhy
,
PDBe:3hhy
,
PDBj:3hhy
PDBsum
3hhy
PubMed
20040374
UniProt
P95607
|CATA_RHOOP Catechol 1,2-dioxygenase (Fragment) (Gene Name=catA)
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