Structure of PDB 3gd9 Chain A Binding Site BS03

Receptor Information
>3gd9 Chain A (length=362) Species: 67325 (Streptomyces matensis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VPATIPLTITNNSGRAEQIHIYNLGTELSSGRQGWADASGAFHPWPAGGN
PPTPAPDASIPGPAPGRSTTIQIPKFSGRIYFSYGRKMEFRLTTGGLVQP
AVQNPTDPNRDILFNWSEYTLNDSGLWINSTQVDMFSAPYTVGVRRGDGT
TLSTGKLRPGGYNGVFNALRGQSGGWANLIQTRSDGTVLRALSPLYGVET
GALPASVMDDYINRVWNKYTGTDLIVTPFADRPDVRYTGRVSGGVLRFTD
GSGAVVTTFQKPDASSVFGCHRLLDAPVRGPISRTLCAGFNRTTLLANPH
QPDRSAAGFYQEPVTNHYARIIHAHMADGKAYGFAFDDVGHHESLVHDGD
PRGASLTLDPFD
Ligand information
Ligand IDBGC
InChIInChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5-,6-/m1/s1
InChIKeyWQZGKKKJIJFFOK-VFUOTHLCSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.6C(C1C(C(C(C(O1)O)O)O)O)O
CACTVS 3.370OC[C@H]1O[C@@H](O)[C@H](O)[C@@H](O)[C@@H]1O
CACTVS 3.370OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 1.7.6C([C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O)O
ACDLabs 12.01OC1C(O)C(OC(O)C1O)CO
FormulaC6 H12 O6
Namebeta-D-glucopyranose;
beta-D-glucose;
D-glucose;
glucose
ChEMBLCHEMBL1614854
DrugBankDB02379
ZINCZINC000003833800
PDB chain3gd9 Chain B Residue 3 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB3gd9 Structure, mechanistic action, and essential residues of a GH-64 enzyme, laminaripentaose-producing beta-1,3-glucanase.
Resolution1.8 Å
Binding residue
(original residue number in PDB)		E154 T167 V169 Y371 A374
Binding residue
(residue number reindexed from 1)		E118 T131 V133 Y332 A335
Annotation score4
Enzymatic activity
Enzyme Commision number 3.2.1.39: glucan endo-1,3-beta-D-glucosidase.
External links