Structure of PDB 2zux Chain A Binding Site BS03

Receptor Information
>2zux Chain A (length=582) Species: 1423 (Bacillus subtilis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ARQMEALNRGLVAVKTDGGIFVSWRFLGTENASVLFNVYRDGQKLNAAPV
KTTNYVDKNGSAGSTYTVRAVVNGTEQPASEKASVWAQPYHSVPLDKPAG
GTTPKGESYTYSANDASVGDVDGDGQYELILKWDPSNSKDNSQDGYTGDV
LIDAYKLDGTKLWRINLGKNIRAGAHYTQFMVYDLDGDGKAEVAMKTADG
TKDGTGKVIGNANADYRNEQGRVLSGPEYLTVFQGSTGKELVTANFEPAR
GNVSDWGDSYGNRVDRFLAGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRD
GKLSKLWTLDSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIFGSMAVDHD
GKGMYSTGLGHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATG
KILWGVYAGKDVGRGMAADIDPRYPGQEVWANGSLYSAKGVKIGSGVPSS
TNFGIWWDGDLLREQLDSNRIDKWDYQNGVSKNMLTASGAAANNGTKATP
TLQADLLGDWREEVVWRTEDSSALRIYTTTIPTEHRLYTLMHDPVYRLGI
AWQNIAYNQPPHTSFFLGDGMAEQPKPNMYTP
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain2zux Chain A Residue 631 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB2zux Structural determinants responsible for substrate recognition and mode of action in family 11 polysaccharide lyases
Resolution1.32 Å
Binding residue
(original residue number in PDB)		D543 L545 G546 D547 R549 E551
Binding residue
(residue number reindexed from 1)		D505 L507 G508 D509 R511 E513
Annotation score4
Enzymatic activity
Enzyme Commision number 4.2.2.23: rhamnogalacturonan endolyase.
Gene Ontology
Molecular Function
GO:0016829 lyase activity
GO:0046872 metal ion binding
GO:0102210 rhamnogalacturonan endolyase activity
Biological Process
GO:0071555 cell wall organization
Cellular Component
GO:0005576 extracellular region

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:2zux, PDBe:2zux, PDBj:2zux
PDBsum2zux
PubMed19193638
UniProtO31526|YESW_BACSU Rhamnogalacturonan endolyase YesW (Gene Name=yesW)

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