Structure of PDB 2vo9 Chain A Binding Site BS03

Receptor Information
>2vo9 Chain A (length=149) Species: 40522 (Listeria phage A500) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AMALTEAWLIEKANRKLNAGGMYKITSDKTRNVIKKMAKEGIYLCVAQGY
RSTAEQNALYAQGRTKPGAIVTNAKGGQSNHNYGVAVDLCLYTNDGKDVI
WESTTSRWKKVVAAMKAEGFKWGGDWKSFKDYPHFELCDAVSGEKIPAA
Ligand information
Ligand IDSO4
InChIInChI=1S/H2O4S/c1-5(2,3)4/h(H2,1,2,3,4)/p-2
InChIKeyQAOWNCQODCNURD-UHFFFAOYSA-L
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0[O-]S(=O)(=O)[O-]
CACTVS 3.341[O-][S]([O-])(=O)=O
ACDLabs 10.04[O-]S([O-])(=O)=O
FormulaO4 S
NameSULFATE ION
ChEMBL
DrugBankDB14546
ZINC
PDB chain2vo9 Chain A Residue 503 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB2vo9 Structural Analysis of the L-Alanoyl-D-Glutamate Endopeptidase Domain of Listeria Bacteriophage Endolysin Ply500 Reveals a New Member of the Las Peptidase Family.
Resolution1.8 Å
Binding residue
(original residue number in PDB)		W7 K11 K96
Binding residue
(residue number reindexed from 1)		W8 K12 K97
Annotation score3
Enzymatic activity
Enzyme Commision number 3.4.24.-
Gene Ontology
Molecular Function
GO:0008233 peptidase activity

View graph for
Molecular Function
External links
PDB RCSB:2vo9, PDBe:2vo9, PDBj:2vo9
PDBsum2vo9
PubMed18560152
UniProtQ37979|AEPE_BPA50 L-alanyl-D-glutamate peptidase (Gene Name=ply)

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