Structure of PDB 2olb Chain A Binding Site BS03

Receptor Information
>2olb Chain A (length=517) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ADVPAGVQLADKQTLVRNNGSEVQSLDPHKIEGVPESNVSRDLFEGLLIS
DVEGHPSPGVAEKWENKDFKVWTFHLRENAKWSDGTPVTAHDFVYSWQRL
ADPNTASPYASYLQYGHIANIDDIIAGKKPATDLGVKALDDHTFEVTLSE
PVPYFYKLLVHPSVSPVPKSAVEKFGDKWTQPANIVTNGAYKLKNWVVNE
RIVLERNPQYWDNAKTVINQVTYLPISSEVTDVNRYRSGEIDMTYNNMPI
ELFQKLKKEIPNEVRVDPYLCTYYYEINNQKAPFNDVRVRTALKLALDRD
IIVNKVKNQGDLPAYSYTPPYTDGAKLVEPEWFKWSQQKRNEEAKKLLAE
AGFTADKPLTFDLLYNTSDLHKKLAIAVASIWKKNLGVNVNLENQEWKTF
LDTRHQGTFDVARAGWCADYNEPTSFLNTMLSDSSNNTAHYKSPAFDKLI
ADTLKVADDTQRSELYAKAEQQLDKDSAIVPVYYYVNARLVKPWVGGYTG
KDPLDNIYVKNLYIIKH
Ligand information
Ligand IDIUM
InChIInChI=1S/2O.U/q2*-1;
InChIKeyIZLHQJIUOZHTLW-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
CACTVS 3.341		[O-][U][O-]
OpenEye OEToolkits 1.5.0[O-][U+4][O-]
FormulaO2 U
NameURANYL (VI) ION
ChEMBL
DrugBank
ZINC
PDB chain2olb Chain A Residue 522 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB2olb The crystal structures of the oligopeptide-binding protein OppA complexed with tripeptide and tetrapeptide ligands.
Resolution1.4 Å
Binding residue
(original residue number in PDB)		D362 D410
Binding residue
(residue number reindexed from 1)		D362 D410
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:1904680 peptide transmembrane transporter activity
Biological Process
GO:0015031 protein transport
GO:0015833 peptide transport
GO:0055085 transmembrane transport
Cellular Component
GO:0030288 outer membrane-bounded periplasmic space
GO:0042597 periplasmic space
GO:0043190 ATP-binding cassette (ABC) transporter complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:2olb, PDBe:2olb, PDBj:2olb
PDBsum2olb
PubMed8747465
UniProtP06202|OPPA_SALTY Periplasmic oligopeptide-binding protein OppA (Gene Name=oppA)

[Back to BioLiP]