Structure of PDB 2j6v Chain A Binding Site BS03

Receptor Information
>2j6v Chain A (length=280) Species: 274 (Thermus thermophilus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GRHMIRLGYPCENLTLGATTNRTLRLAHLTEERVREKAAENLRDLERILR
FNADHGFALFRIGQHLIPFASHPLFPYDWEGAYEEELARLGALARAFGQR
LSMHPGQYVNPGSPDPEVVERSLAELRYSARLLSLLGAEDGVLVLHLGGA
YGEKGKALRRFVENLRGEEEVLRYLALENDERLWNVEEVLKAAEALGVPV
VVDTLHHALNPGRLPLEEALRLAFPTWRGRPKVHLASQDPKKRPGAHAFR
VTREDWERLLSALPGPADVMVEAKGKEQGL
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain2j6v Chain A Residue 1280 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB2j6v Crystal Structure of the DNA Repair Enzyme Ultraviolet Damage Endonuclease.
Resolution1.55 Å
Binding residue
(original residue number in PDB)
H203 H244
Binding residue
(residue number reindexed from 1)
H206 H247
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0004519 endonuclease activity
GO:0046872 metal ion binding
Biological Process
GO:0006281 DNA repair
GO:0006289 nucleotide-excision repair
GO:0009411 response to UV

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:2j6v, PDBe:2j6v, PDBj:2j6v
PDBsum2j6v
PubMed17937920
UniProtQ746K1

[Back to BioLiP]